| Port details |
- fluctuate Program to fit population models
- 1.40 biology
 =2      1.40Version of this port present on the latest quarterly branch. - There is no maintainer for this port.
- Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
- Port Added: 2001-08-06 11:45:39
- Last Update: 2022-09-07 21:58:51
- Commit Hash: fb16dfe
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- License: not specified in port
- WWW:
- https://evolution.genetics.washington.edu/lamarc/fluctuate.html
- Description:
- Fluctuate fits the model which has a single population which has been growing
(or shrinking) according to an exponential growth law. It estimates 4Nu and
g, where N is the effective population size, u is the neutral mutation rate
per site, and g is the growth rate of the population.
Fluctuate forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite. See:
http://evolution.genetics.washington.edu/lamarc.html
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- fluctuate>0:biology/fluctuate
- To install the port:
- cd /usr/ports/biology/fluctuate/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/fluctuate
- pkg install fluctuate
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: fluctuate
- Flavors: there is no flavor information for this port.
- distinfo:
- SHA256 (fluctuate1.4.src.doc.tar.gz) = 920ce06de2a02e18c149a803f9c5f32657948b88c0c97c5297371949f0cde109
SIZE (fluctuate1.4.src.doc.tar.gz) = 70690
Packages (timestamps in pop-ups are UTC):
- This port has no dependencies.
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for fluctuate-1.40:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
- Options name:
- biology_fluctuate
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
07 Sep 2022 21:58:51
 |
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
1.40
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
1.40
20 Jul 2022 14:20:57
|
Tobias C. Berner (tcberner) |
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca> (Only the first 15 lines of the commit message are shown above ) |
1.40
06 Apr 2021 14:31:07
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
1.40
19 Nov 2015 00:51:15
 |
amdmi3 |
- Switch to options helpers |
1.40
22 May 2015 13:34:22
|
mat |
Remove $FreeBSD$ from patches files in categories a-j.
With hat: portmgr
Sponsored by: Absolight |
1.40
16 Feb 2014 11:35:01
|
ehaupt |
Support staging |
1.40
20 Sep 2013 15:55:44
|
bapt |
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology) |
1.40
19 Jun 2013 12:43:28
|
bsam |
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. use PLIST_FILES and PORTDOCS;
. get rid of pkg-plist;
. pet portlint: use one space after WWW: at pkg-descr;
. trim Makefile headers;
. remove the indefinite article from COMMENT. |
1.40
19 Mar 2011 12:38:54
|
miwi |
- Get Rid MD5 support |
1.40
21 Dec 2009 02:19:12
|
dougb |
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports. |
1.40
25 Jan 2007 11:01:25
|
vd |
Fix master site and un-deprecate |
1.40
10 Dec 2006 12:37:38
|
gabor |
- Deprecate
- Set EXPIRATION_DATE
Approved by: erwin (mentor) |
1.40
24 Nov 2005 00:04:00
|
pav |
- Add SHA256 |
1.40
18 Feb 2005 13:41:09
|
krion |
Readd mistakenly removed patch to honour CC/CFLAGS. |
1.40
18 Feb 2005 13:39:34
|
krion |
Update to version 1.40
PR: ports/77675
Submitted by: Sam Lawrance <boris at brooknet.com.au> |
1.30
20 Nov 2004 08:09:49
|
linimon |
With portmgr hat on, reset inactive maintainer. These ports are now up
for adoption. |
1.30
31 Mar 2004 03:12:58
|
trevor |
SIZEify (maintainer timeout) |
1.30
22 Oct 2003 09:29:55
|
osa |
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.
Submitted by: Oleg Karachevtsev <ok@etrust.ru>
A part of PR: 57992 |
1.30
07 Mar 2003 05:56:43
|
ade |
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti. |
06 Aug 2001 15:45:39
|
wjv |
Add fluctuate 1.30, a program to fit population models. |
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