Port details |
- R-cran-lme4 Linear mixed-effects models using Eigen and S4
- 1.1.37 math
=2 1.1.37Version of this port present on the latest quarterly branch. - Maintainer: eduardo@FreeBSD.org
 - Port Added: 2015-11-15 12:08:02
- Last Update: 2025-03-29 00:53:50
- Commit Hash: b7990da
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py311-PyOpenGL, p5-Sane
- License: GPLv2+
- WWW:
- https://cran.r-project.org/package=lme4
- Description:
- Fit linear and generalized linear mixed-effects models. The models
and their components are represented using S4 classes and methods.
The core computational algorithms are implemented using the Eigen
C++ library for numerical linear algebra and RcppEigen "glue".
¦ ¦ ¦ ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- R-cran-lme4>0:math/R-cran-lme4
- To install the port:
- cd /usr/ports/math/R-cran-lme4/ && make install clean
- To add the package, run one of these commands:
- pkg install math/R-cran-lme4
- pkg install R-cran-lme4
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: R-cran-lme4
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1743173049
SHA256 (lme4_1.1-37.tar.gz) = cfdb756c445fdda069307945798dae1646557df2ed417ac06572eab47fbef00c
SIZE (lme4_1.1-37.tar.gz) = 3313529
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- R-cran-minqa>=1.1.15 : math/R-cran-minqa
- R-cran-nloptr>=1.0.4 : math/R-cran-nloptr
- R-cran-Rcpp>=0.10.5 : devel/R-cran-Rcpp
- R-cran-RcppEigen>=0.3.3.9.4 : math/R-cran-RcppEigen
- R-cran-reformulas>=0.3.0 : math/R-cran-reformulas
- R : math/R
- gfortran13 : lang/gcc13
- as : devel/binutils
- Test dependencies:
-
- R-cran-ggplot2>0 : graphics/R-cran-ggplot2
- R-cran-knitr>0 : print/R-cran-knitr
- R-cran-optimx>0 : misc/R-cran-optimx
- Runtime dependencies:
-
- R-cran-minqa>=1.1.15 : math/R-cran-minqa
- R-cran-nloptr>=1.0.4 : math/R-cran-nloptr
- R-cran-Rcpp>=0.10.5 : devel/R-cran-Rcpp
- R-cran-RcppEigen>=0.3.3.9.4 : math/R-cran-RcppEigen
- R-cran-reformulas>=0.3.0 : math/R-cran-reformulas
- R : math/R
- gfortran13 : lang/gcc13
- This port is required by:
- for Build
-
- science/afni
- for Run
-
- math/R-cran-car
- math/R-cran-pbkrtest
- science/afni
Configuration Options:
- No options to configure
- Options name:
- math_R-cran-lme4
- USES:
- cran:auto-plist,compiles
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
1.1.37 29 Mar 2025 00:53:50
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-37
- Switch WWW to canonical form
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.36 12 Jan 2025 14:01:10
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-36
- Pet portfmt
- Mark TESTING_UNSAFE
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.35.5 05 Jul 2024 13:51:47
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-35.5
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.35.4 20 Jun 2024 19:22:46
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-35.4
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.35.3 18 Apr 2024 08:31:02
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-35.3
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.35.2 29 Mar 2024 09:19:12
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-35.2
- Switch WWW to CRAN package repository
- Add missing test depends
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.35.1 05 Nov 2023 14:36:51
    |
Nuno Teixeira (eduardo)  |
math/R-cran-lme4: Update to 1.1-35.1
- Define LICENSE_FILE
- Take maintainership
ChangeLog: https://cran.r-project.org/web/packages/lme4/news.html |
1.1.34 14 Aug 2023 07:34:16
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-34
Reported by: portscout |
1.1.33 08 May 2023 10:35:28
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-33
- Update to 1.1-33
- Drop maintainership |
1.1.30_1 23 Apr 2023 09:09:58
    |
Gerald Pfeifer (gerald)  |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
07 Sep 2022 21:58:51
    |
Stefan Eßer (se)  |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
1.1.30 07 Sep 2022 21:10:59
    |
Stefan Eßer (se)  |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above ) |
1.1.30 20 Jul 2022 14:22:24
    |
Tobias C. Berner (tcberner)  |
math: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Aaron Dalton <aaron@daltons.ca>
* Alessando Sagratini <ale_sagra@hotmail.com>
* Alex Dupre <ale@FreeBSD.org>
* Alexey Dokuchaev <danfe@FreeBSD.org>
* Amarendra Godbole <amarendra.godbole@gmail.com>
* Anders Nordby <anders@FreeBSD.org>
* Andreas Fehlner (fehlner@gmx.de)
* Andrew L. Neporada <andrew@chg.ru>
* Andrey <gugu@zoo.rambler.ru>
* Andrey Zakhvatov (Only the first 15 lines of the commit message are shown above ) |
1.1.30 16 Jul 2022 23:07:35
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-30 |
1.1.29 09 Apr 2022 01:35:15
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-29 |
1.1.28 09 Feb 2022 02:25:04
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-28 |
1.1.27.1 24 Jun 2021 00:24:53
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-27.1 |
1.1.27 17 May 2021 21:28:29
    |
TAKATSU Tomonari (tota)  |
math/R-cran-lme4: Update to 1.1-27 |
1.1.26 06 Apr 2021 14:31:07
    |
Mathieu Arnold (mat)  |
Remove # $FreeBSD$ from Makefiles. |
1.1.26 23 Dec 2020 04:52:00
  |
tota  |
- Update to 1.1-26 |
1.1.25 26 Oct 2020 12:12:06
  |
tota  |
- Update to 1.1-25 |
1.1.23_1 05 May 2020 16:07:54
  |
jrm  |
math/R: Update to version 4.0.0
Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html
Also bump PORTREVISION of ports that depend on math/R.
Submitted by: wen (in part)
Reviewed by: jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision: https://reviews.freebsd.org/D24572 |
1.1.23 08 Apr 2020 16:29:58
  |
tota  |
- Update to 1.1-23 |
1.1.21_1 26 Jul 2019 20:46:57
  |
gerald  |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
1.1.21 06 Jul 2019 22:37:33
  |
tota  |
- Update to 1.1-21 |
1.1.19_1 12 Dec 2018 01:35:36
  |
gerald  |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
1.1.19 19 Nov 2018 02:21:10
  |
tota  |
- Update to 1.1-19 |
1.1.18.1 24 Aug 2018 02:04:54
  |
tota  |
- Update to 1.1-18-1 |
1.1.17 12 Apr 2018 02:02:08
  |
tota  |
- Update to 1.1-17 |
1.1.16 02 Apr 2018 02:21:25
  |
tota  |
- Update to 1.1-16 |
1.1.14_1 10 Mar 2018 17:46:06
  |
gerald  |
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079). |
1.1.14 29 Sep 2017 04:31:58
  |
tota  |
- Update to 1.1-14 |
1.1.13 26 Jun 2017 19:37:12
  |
sunpoet  |
Fix WWW
Approved by: portmgr (blanket) |
1.1.13 07 May 2017 06:47:47
  |
tota  |
- Update to 1.1-13 |
1.1.12 15 Jul 2016 06:02:09
  |
tota  |
- Update to 1.1-12
- Fix LICENSE
- Add "compiles" argument to USES=cran |
1.1.10 01 Apr 2016 14:16:20
  |
mat  |
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.
With hat: portmgr
Sponsored by: Absolight |
1.1.10 15 Nov 2015 12:07:55
  |
tota  |
- Add new port: math/R-cran-lme4
Fit linear and generalized linear mixed-effects models. The models
and their components are represented using S4 classes and methods.
The core computational algorithms are implemented using the Eigen
C++ library for numerical linear algebra and RcppEigen "glue".
WWW: https://github.com/lme4/lme4/ |