| Port details |
- andi Efficient estimation of evolutionary distances
- 0.14.3 biology
 =0      Package not present on quarterly.This port was created during this quarter. It will be in the next quarterly branch but not the current one. - Maintainer: yuri@FreeBSD.org
- Port Added: 2024-09-07 21:33:06
- Last Update: 2024-09-07 21:31:10
- Commit Hash: 7989e8d
- Also Listed In: devel
- License: GPLv3
- WWW:
- https://github.com/EvolBioInf/andi
- Description:
- andi is a program for estimating the evolutionary distance between closely
related genomes. These distances can be used to rapidly infer phylogenies
for big sets of genomes. Because andi does not compute full alignments,
it is so efficient that it scales even up to thousands of bacterial genomes.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- To install the port:
- cd /usr/ports/biology/andi/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/andi
- pkg install andi
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: andi
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1725743879
SHA256 (EvolBioInf-andi-v0.14-3-g390af15_GH0.tar.gz) = 7373445abd107bbc7fed2f3f01e3dbc34955089cf0690e26beb16bd4014b39ce
SIZE (EvolBioInf-andi-v0.14-3-g390af15_GH0.tar.gz) = 539569
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.4.1 : devel/gmake
- pkgconf>=1.3.0_1 : devel/pkgconf
- autoconf>=2.72 : devel/autoconf
- automake>=1.17 : devel/automake
- Library dependencies:
-
- libdivsufsort.so : math/libdivsufsort
- libgsl.so : math/gsl
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for andi-0.14.3:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
- Options name:
- biology_andi
- USES:
- autoreconf gmake localbase pkgconfig
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
0.14.3
07 Sep 2024 21:31:10
 |
Yuri Victorovich (yuri) |
biology/andi: New ports: Efficient estimation of evolutionary distances |
Number of commits found: 1
|
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