| Port details |
- andi Efficient estimation of evolutionary distances
- 1.15 biology
 =0      0.14.3Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2024-09-07 21:33:06
- Last Update: 2026-02-16 07:13:44
- Commit Hash: 21669a7
- Also Listed In: devel
- License: GPLv3
- WWW:
- https://github.com/EvolBioInf/andi
- Description:
- andi is a program for estimating the evolutionary distance between closely
related genomes. These distances can be used to rapidly infer phylogenies
for big sets of genomes. Because andi does not compute full alignments,
it is so efficient that it scales even up to thousands of bacterial genomes.
  ¦  ¦  ¦  ¦ 
- Manual pages:
-
- pkg-plist: as obtained via:
make generate-plist - USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- To install the port:
- cd /usr/ports/biology/andi/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/andi
- pkg install andi
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: andi
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1771217574
SHA256 (EvolBioInf-andi-v1.15_GH0.tar.gz) = 2e26ab53c06740b2d71d7905b185f49b53108a918f1640e3610a7f48b485a047
SIZE (EvolBioInf-andi-v1.15_GH0.tar.gz) = 551244
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.4.1 : devel/gmake
- pkgconf>=1.3.0_1 : devel/pkgconf
- autoconf>=2.72_1 : devel/autoconf
- automake>=1.18.1 : devel/automake
- Library dependencies:
-
- libdivsufsort.so : math/libdivsufsort
- libgsl.so : math/gsl
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for andi-1.15:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
- Options name:
- biology_andi
- USES:
- autoreconf gmake localbase pkgconfig
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 3
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
1.15
16 Feb 2026 07:13:44
 |
Yuri Victorovich (yuri) |
biology/andi: update 0.14-3 → 1.15
Reported by: portscout |
0.14.3_1
29 Jan 2026 13:16:02
|
Max Brazhnikov (makc) |
*/*: chase math/gsl update to 2.8
PR: 292499 |
0.14.3
07 Sep 2024 21:31:10
|
Yuri Victorovich (yuri) |
biology/andi: New ports: Efficient estimation of evolutionary distances |
Number of commits found: 3
|
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