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Port details
btllib Bioinformatics Technology Lab common code library
1.7.5 biology on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.7.3Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-07-21 22:27:04
Last Update: 2024-12-05 18:11:11
Commit Hash: bec50be
People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
Also Listed In: devel
License: GPLv3
WWW:
https://github.com/bcgsc/btllib
Description:
Bioinformatics Technology Lab's common code library in C++.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (38 items)
Collapse this list.
  1. /usr/local/share/licenses/btllib-1.7.5/catalog.mk
  2. /usr/local/share/licenses/btllib-1.7.5/LICENSE
  3. /usr/local/share/licenses/btllib-1.7.5/GPLv3
  4. bin/indexlr
  5. bin/mi_bf_generate
  6. bin/randseq
  7. include/btllib/aahash.hpp
  8. include/btllib/bloom_filter.hpp
  9. include/btllib/counting_bloom_filter-inl.hpp
  10. include/btllib/counting_bloom_filter.hpp
  11. include/btllib/cpptoml.h
  12. include/btllib/cstring.hpp
  13. include/btllib/data_stream.hpp
  14. include/btllib/graph.hpp
  15. include/btllib/hashing_internals.hpp
  16. include/btllib/indexlr.hpp
  17. include/btllib/mi_bloom_filter-inl.hpp
  18. include/btllib/mi_bloom_filter.hpp
  19. include/btllib/nthash.hpp
  20. include/btllib/nthash_kmer.hpp
  21. include/btllib/nthash_seed.hpp
  22. include/btllib/order_queue.hpp
  23. include/btllib/process_pipeline.hpp
  24. include/btllib/randseq.hpp
  25. include/btllib/seq.hpp
  26. include/btllib/seq_reader.hpp
  27. include/btllib/seq_reader_fasta_module.hpp
  28. include/btllib/seq_reader_fastq_module.hpp
  29. include/btllib/seq_reader_multiline_fasta_module.hpp
  30. include/btllib/seq_reader_multiline_fastq_module.hpp
  31. include/btllib/seq_reader_sam_module.hpp
  32. include/btllib/seq_writer.hpp
  33. include/btllib/status.hpp
  34. include/btllib/util.hpp
  35. lib/libbtllib.so
  36. @owner
  37. @group
  38. @mode
Collapse this list.
Dependency lines:
  • btllib>0:biology/btllib
To install the port:
cd /usr/ports/biology/btllib/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/btllib
  • pkg install btllib
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: btllib
Flavors: there is no flavor information for this port.
NOT_FOR_ARCHS: armv6 armv7 i386 mips powerpc
distinfo:
TIMESTAMP = 1733374207 SHA256 (bcgsc-btllib-v1.7.5_GH0.tar.gz) = a4c9cdd2c1d37d7f0465dc15e6267693f74e5e3b547b5ff187989abf1e4ca0b8 SIZE (bcgsc-btllib-v1.7.5_GH0.tar.gz) = 956716

Expand this list (4 items)

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SHA256 (p-ranav-argparse-15d745f_GH0.tar.gz) = f033d4eb4a430b4ae4bf3c2a40e087709bf77462c1f9968ae07828437219a370 SIZE (p-ranav-argparse-15d745f_GH0.tar.gz) = 105608 SHA256 (skystrife-cpptoml-fededad_GH0.tar.gz) = dd2d129b67f537ae7d6f8d8d084c8c0d772d0f5b4b3118c1892e67ff536e335e SIZE (skystrife-cpptoml-fededad_GH0.tar.gz) = 47398

Collapse this list.

Packages (timestamps in pop-ups are UTC):
btllib
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest1.7.51.7.5------
FreeBSD:13:quarterly1.7.51.7.5----1.7.01.7.0
FreeBSD:14:latest1.7.51.7.5------
FreeBSD:14:quarterly1.7.51.7.5----1.7.01.7.0
FreeBSD:15:latest1.7.51.7.5n/a-n/a-1.7.01.7.0
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. bash : shells/bash
  2. samtools : biology/samtools
  3. cmake : devel/cmake-core
  4. meson : devel/meson
  5. ninja : devel/ninja
  6. pkgconf>=1.3.0_1 : devel/pkgconf
  7. python3.11 : lang/python311
Runtime dependencies:
  1. samtools : biology/samtools
Library dependencies:
  1. libsdsl.so : devel/sdsl-lite
This port is required by:
for Libraries
  1. biology/abyss
Configuration Options:
No options to configure
Options name:
biology_btllib
USES:
meson pkgconfig python:build shebangfix
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/bcgsc/btllib/tar.gz/v1.7.5?dummy=/
Collapse this list.

Number of commits found: 7

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.7.5
05 Dec 2024 18:11:11
commit hash: bec50be298b0c227e1e41f3d72bb50815915e556commit hash: bec50be298b0c227e1e41f3d72bb50815915e556commit hash: bec50be298b0c227e1e41f3d72bb50815915e556commit hash: bec50be298b0c227e1e41f3d72bb50815915e556 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: update 1.7.3 → 1.7.5

Reported by:	portscout
1.7.3
27 Jul 2024 20:19:18
commit hash: c1ef3af576cc8850f0a09708a34559b349e1d327commit hash: c1ef3af576cc8850f0a09708a34559b349e1d327commit hash: c1ef3af576cc8850f0a09708a34559b349e1d327commit hash: c1ef3af576cc8850f0a09708a34559b349e1d327 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: update 1.7.2 → 1.7.3

Reported by:	portscout
1.7.2
09 Apr 2024 07:40:58
commit hash: 2b249f60f0c9d90da8b7c029128285362bb5ad4acommit hash: 2b249f60f0c9d90da8b7c029128285362bb5ad4acommit hash: 2b249f60f0c9d90da8b7c029128285362bb5ad4acommit hash: 2b249f60f0c9d90da8b7c029128285362bb5ad4a files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: update 1.7.1 → 1.7.2

Reported by:	portscout
1.7.1
04 Apr 2024 08:05:06
commit hash: 9632a58ad8e8d657dfa1c2449e07672651694b9ccommit hash: 9632a58ad8e8d657dfa1c2449e07672651694b9ccommit hash: 9632a58ad8e8d657dfa1c2449e07672651694b9ccommit hash: 9632a58ad8e8d657dfa1c2449e07672651694b9c files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: update 1.7.0 → 1.7.1

Reported by:	portscout
1.7.0
12 Jan 2024 03:01:51
commit hash: 7f06db3019ba82a730fa6f6e018f7576d17612e2commit hash: 7f06db3019ba82a730fa6f6e018f7576d17612e2commit hash: 7f06db3019ba82a730fa6f6e018f7576d17612e2commit hash: 7f06db3019ba82a730fa6f6e018f7576d17612e2 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: Temporarily not for non-64-bit architectures

Until the breakage is fixed by the upstream.

Reported by:	https://portsfallout.com/
1.7.0
13 Dec 2023 05:22:27
commit hash: e8a2beffcfee05252fffebbc49178fb01493cb5fcommit hash: e8a2beffcfee05252fffebbc49178fb01493cb5fcommit hash: e8a2beffcfee05252fffebbc49178fb01493cb5fcommit hash: e8a2beffcfee05252fffebbc49178fb01493cb5f files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: update 1.6.2 → 1.7.0

Reported by:	portscout
1.6.2
21 Jul 2023 22:24:04
commit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8e files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: New port: Bioinformatics Technology Lab common code library

Number of commits found: 7
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