biology/lamarc: Mark BROKEN on 14

Fails to compile with:
error: no matching function for call to 'make_pair'

Sponsored by:	The FreeBSD Foundation

biology/lamarc: Refactor after wxgtk28 removal

- Pet portclippy

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

biology: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Akinori MUSHA aka knu <knu@idaemons.org>
  *  Andrey Zakhvatov
  *  Bob Zimmermann <rpz@cse.wustl.edu>
  *  Camson Huynh <chuynh@biolateral.com.au>
  *  Dan Siercks <dsiercks@uwm.edu>
  *  Fernan Aguero <fernan@iib.unsam.edu.ar>
  *  Hannes Hauswedell <h2+fbsdports@fsfe.org>
  *  J. Bacon <jwb@FreeBSD.org>
  *  Jason Bacon <jwb@FreeBSD.org>
  *  Jeremy <karlj000@unbc.ca>

Remove # $FreeBSD$ from Makefiles.

biology/lamarc: Fix build with Clang 6

src/tools/mathx.cpp:781:12: error: no matching function for call to 'make_pair'
    return std::make_pair<DoubleVec1d, DoubleVec2d>(eigvals, eigvecs);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/v1/utility:639:1: note: candidate function not viable: no known
conversion from 'DoubleVec1d' (aka 'vector<double>') to
'std::__1::vector<double, std::__1::allocator<double> > &&' for 1st argument
make_pair(_T1&& __t1, _T2&& __t2)
^

http://beefy11.nyi.freebsd.org/data/head-i386-default/p477696_s338122/logs/errors/lamarc-2.1.8_1,1.log

biology/lamarc: Fix build on DF (taken from dports)

- Switch to options helpers
- Regenerate patches with `make makepatch`
- Mark WXGTK option broken: does not build:
src/convErr/gc_errhandling.cpp:75:12: error: cannot initialize return object of
type 'const char *' with an rvalue of type 'const wxChar *' (aka 'const wchar_t
*')

Cleanup GH_* and variables order.

Sponsored by:	Absolight

Remove ansi version fo wxGTK 2.8 and only keep the unicode version

All applications in the ports tree works correctly with unicode version of wxGTK

Newer version of wxGTK are unicode only (3.0+)

Note that now WX_UNICODE macro is noop

Enfoce unicode version of wxGTK

- rename AL2 to APACHE20 in Mk/bsd.licenses.db.mk
- svn move Templates/Licenses/AL2 Templates/Licenses/APACHE20
- add APACHE10 and APACHE11 to Mk/bsd.licenses.db.mk
- add entry in UPDATING
- bulk change all ports AL2 => APACHE20

- math/openfst/pkg-plist: remove share/licenses/openfst-1.3.4

PR:		ports/184785
Submitted by:	ohauer
Reviewed by:	tabthorpe
Approved by:	portmgr (tabthorpe@)

biology/lamarc: fix build on current

PR:		ports/184219
Submitted by:	KATO Tsuguru <tkato432 yahoo.com>

- Remove NO_STAGE as these have been tested to be safe

With hat:	portmgr

Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)

- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)

. trim Makefile headers;
. remove the indefinite article from COMMENT.

- Fix build with clang

Feature safe:	yes

- Update to version 2.1.8

Remove file:
files/patch-Makefile.in
files/patch-configure
files/patch-src__control__defaults.h
pkg-plist

PR:             ports/168994
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>

Set maintainership back to ports@

Remove non-serving mirror

- The proper acronym for Apache Software License 2 is really AL2
- Thanks to crees@ for generating the initial patch

PR:             ports/163521
Submitted by:   Pedro Giffuni <pfg apache.org>
Hat:            portmgr
Exp run by:     pav

Change maintainer address to my FreeBSD address

Approved by:    wen@ (mentor)

Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since
mid 2008.

PR:             ports/159624
Submitted by:   Ruslan Mahmatkhanov <cvs-src@yandex.ru>

- Get Rid MD5 support

- Update to 2.1.5
- Pass maintainership to submitter

PR:             ports/149247
Submitted by:   C-S <c-s AT c-s.li>

- Reset more ports I don't use anymore

- Mark most of my ports MAKE_JOBS_SAFE=yes

Tested by: several builds in P6 TB

- Update to 2.1.3

Approved by:    gabor (mentor)

Update my ports to my freebsd address

Approved by:    araujo (mentor)

- Update to 2.1.2c.
- Pass maintainership to submitter.

PR:             ports/125497
Submitted by:   Philip M. Gollucci <pgollucci@p6m7g8.com>

- Update to 2.1.2b

PR:             117336
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>

- Update to 2.1

PR:             116017
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>

Get rid of biology/coalesce dependency, it is deprecated and will be removed
shortly.

With portmgr hat on, reset inactive maintainer.  These ports are now up
for adoption.

Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.

Add lamarc 2001.08.06,   a package of programs for computing   population
parameters.