Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
07 Sep 2022 21:58:51
    |
Stefan Eßer (se)  |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
2.0.1 07 Sep 2022 21:10:59
    |
Stefan Eßer (se)  |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above ) |
2.0.1 20 Jul 2022 14:20:57
    |
Tobias C. Berner (tcberner)  |
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca> (Only the first 15 lines of the commit message are shown above ) |
2.0.1 06 Apr 2021 14:31:07
    |
Mathieu Arnold (mat)  |
Remove # $FreeBSD$ from Makefiles. |
2.0.1 06 Oct 2018 13:06:45
  |
des  |
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.
Approved by: portmgr (adamw) |
2.0.1 27 May 2018 20:15:20
  |
sunpoet  |
Update WWW
search.cpan.org is shutting down.
It will redirect to metacpan.org after June 25, 2018.
With hat: perl |
2.0.1 26 Dec 2017 23:20:28
  |
sunpoet  |
Update to 2.0.1
Changes: https://github.com/rvosa/bio-phylo/releases |
0.58_1 15 Sep 2017 08:58:50
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mat  |
Fix license information for portgs that use "the same license as Perl".
Sponsored by: Absolight |
0.58_1 18 Dec 2016 15:25:22
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sunpoet  |
- Add LICENSE_FILE
- Add NO_ARCH
- Bump PORTREVISION for biology/p5-bioperl renaming |
0.58 19 May 2016 10:21:25
  |
amdmi3  |
- Fix trailing whitespace in pkg-descrs, categories [a-f]*
Approved by: portmgr blanket |
0.58 01 Apr 2016 13:29:17
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mat  |
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight |
0.58 07 Dec 2014 04:41:48
  |
wen  |
- Update to 0.58 |
0.56_1 26 Nov 2014 13:08:38
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mat  |
Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:
site_perl : lib/perl5/site_perl/5.18
site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
perl_man3 : lib/perl5/5.18/man/man3
Now we have:
site_perl : lib/perl5/site_perl
site_arch : lib/perl5/site_perl/mach/5.18
perl_man3 : lib/perl5/site_perl/man/man3
Modules without any .so will be installed at the same place regardless of the (Only the first 15 lines of the commit message are shown above ) |
0.56 20 Oct 2014 07:10:48
  |
bapt  |
Cleanup plist |
0.56 05 Jan 2014 12:07:21
  |
az  |
- support stage |
0.56 20 Sep 2013 15:55:44
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bapt  |
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology) |
0.56 02 Aug 2013 18:52:11
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mat  |
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default. |
0.56 20 Jul 2013 10:04:33
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wen  |
- Update to 0.56 |
0.52 16 Feb 2013 14:58:52
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culot  |
- Update to 0.52 [1]
- Capitalize names (Perl) in COMMENT
PR: ports/176003 [1]
Submitted by: Gea-Suan Lin <gslin@gslin.org> |
0.50 12 Jun 2012 18:55:28
 |
sunpoet  |
- Update to 0.50
- Add TEST_DEPENDS
- Sort PLIST |
0.49 03 Jun 2012 15:12:49
 |
sunpoet  |
- Update to 0.49 |
0.48_1 01 Jun 2012 05:26:28
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dinoex  |
- update png to 1.5.10 |
0.48 03 May 2012 09:48:21
 |
sunpoet  |
- Update to 0.48
- Add BUILD_DEPENDS |
0.47 11 Apr 2012 01:34:57
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wen  |
- Update to 0.47 |
0.46 05 Mar 2012 08:22:46
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wen  |
- Update to 0.46 |
0.45 29 Oct 2011 06:20:45
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sunpoet  |
- Update to 0.45 |
0.43 17 Oct 2011 01:38:22
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sunpoet  |
- Update to 0.43 |
0.40 09 Aug 2011 18:26:45
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culot  |
- Update to 0.40
- Add LICENSE (Artistic 1 & GPLv1) |
0.39 01 Aug 2011 03:11:37
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sunpoet  |
- Update to 0.39 |
0.38 16 Jul 2011 06:08:34
 |
sunpoet  |
- Update to 0.38
- Sort MAN3 and PLIST |
0.36 01 Apr 2011 08:34:03
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wen  |
- Update to 0.36 |
0.35 28 Feb 2011 01:30:15
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wen  |
- Update to 0.35 |
0.34 23 Dec 2010 06:33:33
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wen  |
- Update to 0.34 |
0.33 16 Dec 2010 08:19:56
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wen  |
- Update to 0.33 |
0.32 12 Dec 2010 21:29:40
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pgollucci  |
- Update to 0.32
With Hat: perl@
Changes: http://search.cpan.org/dist/Bio-Phylo/Changes |
0.31 22 Nov 2010 08:50:40
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wen  |
- Update to 0.31 |
0.30 17 Nov 2010 06:24:38
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wen  |
- Update to 0.30
PR: ports/152205
Submitted by: Gea-Suan Lin <gslin@gslin.org> |
0.28 09 Nov 2010 14:15:44
 |
jadawin  |
- Update to 0.28 |
0.26 25 Oct 2010 10:59:25
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wen  |
- Update to 0.26
- Reset maintainer to perl@ |
0.22 22 Oct 2010 09:29:44
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wen  |
- Update to 0.22 |
0.21_1 28 Mar 2010 06:47:48
 |
dinoex  |
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi |
0.21 09 Mar 2010 07:34:48
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wen  |
- Update to 0.21 |
0.18 03 Mar 2010 13:44:19
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wen  |
- Update to 0.18
- Adopt
Feature safe: yes |
0.16_2 05 Feb 2010 11:46:55
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dinoex  |
- update to jpeg-8 |
0.16_1 21 Dec 2009 02:19:12
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dougb  |
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports. |
0.16_1 31 Jul 2009 13:57:52
 |
dinoex  |
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by: edwin |
0.16 29 Apr 2008 05:27:10
 |
linimon  |
Reset aaron's port maintainerships due to many maintainer-timeouts. |
0.16 17 Apr 2008 14:30:31
 |
araujo  |
- Take advantage of CPAN macro from bsd.sites.mk, change
${MASTER_SITE_PERL_CPAN} to CPAN.
PR: ports/122674
Submitted by: Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by: araujo (myself)
Approved by: portmgr (pav) |
0.16 08 Sep 2007 00:53:15
 |
linimon  |
Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.
Work done by: gabor
Sponsored by: Google Summer of Code 2007
Hat: portmgr |
0.16 19 Jun 2007 20:15:59
 |
aaron  |
Bump to v0.16.
PR: 111719
Submitted by: araujo@bsdmail.org |
0.15_1 19 May 2007 20:32:57
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flz  |
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}. |
0.15 27 Dec 2006 18:58:26
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aaron  |
Update to v0.15 |
0.14 07 Dec 2006 15:43:27
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laszlof  |
- Update to 0.14
Submitted by: Jin-Shan Tseng <tjs@cdpa.nsysu.edu.tw>
Approved by: maintainer timeout (3 months) |
0.12 19 May 2006 23:18:32
 |
aaron  |
- Updated from 0.07 to 0.12
Approved by: tobez (implicit)
0.08 20/Feb/2006 15:14
Improved referential integrity between nodes,
taxa, and data.
Implemented Fastnexus parser
Node object silently implements Bio::Tree::NodeI
interface if BioPerl is installed
Tree object silently implements Bio::Tree::TreeI
interface if BioPerl is installed
Added convertor methods for XML and CIPRES
Implemented more Matrix methods
Implemented symbol tables in Bio::Phylo::Util::CONSTANT
Implemented visit method for listable objects
Implemented caching infrastructure for calculations
Changed object-model to inside-out arrays
Added Biodiversity measures code by Aki Mimoto
Moved constants and exceptions to Bio::Phylo::Util::*
Fixed memory leak due to circular references |
0.07 13 May 2006 16:48:15
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aaron  |
Adding port biology/p5-Bio-Phylo, Phylogenetic analysis using perl.
Approved by: tobez (implicit) |