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Port details
p5-bioperl-run-devel Wrapper modules for common bioinformatics tools (developer release)
1.5.1_1 biology Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.5.1_1Version of this port present on the latest quarterly branch.
Broken BROKEN: this port needs dependency update to p5-bioperl=1.5.2 and Build.PL mechanism
Deprecated DEPRECATED: no longer under development
Expired This port expired on: 2009-05-31
Ignore IGNORE: is marked as broken: this port needs dependency update to p5-bioperl=1.5.2 and Build.PL mechanism
Maintainer: mauricio@arareko.net search for ports maintained by this maintainer
Port Added: 2006-05-02 21:34:04
Last Update: 2009-06-05 20:38:36
SVN Revision: UNKNOWN
Also Listed In: perl5
License: not specified in port
WWW:
http://bioperl.org/
Description:
Bioperl-run contain modules that provides a PERL interface to various bioinformatics applications. This allows various applications to be used with common Bioperl objects. WWW: http://bioperl.org/
Homepage    cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • p5-bioperl-run>0:biology/p5-bioperl-run-devel
No installation instructions:
This port has been deleted.
PKGNAME: p5-bioperl-run
Flavors: there is no flavor information for this port.
distinfo:
There is no distinfo for this port.

No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. p5-bioperl=1.5.1_1 : biology/p5-bioperl-devel
  2. Diff.pm : devel/p5-Algorithm-Diff
  3. perl5.8.9 : lang/perl5.8
Runtime dependencies:
  1. p5-bioperl=1.5.1_1 : biology/p5-bioperl-devel
  2. Diff.pm : devel/p5-Algorithm-Diff
  3. perl5.8.9 : lang/perl5.8
  4. perl5.8.9 : lang/perl5.8
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
N/A
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/
  2. http://bioperl.org/DIST/
Collapse this list.

Number of commits found: 6

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.5.1_1
05 Jun 2009 20:38:36
Original commit files touched by this commit
miwi search for other commits by this committer
2009-05-31 biology/p5-bioperl-devel: no longer under development
2009-05-31 biology/p5-bioperl-run-devel: no longer under development
2009-06-01 net-p2p/deluge05: use net-p2p/deluge instead
2009-06-03 textproc/gmat: failed to build for a long time, no maintainer and
apparently no users either
1.5.1_1
19 Mar 2009 19:29:34
Original commit files touched by this commit
miwi search for other commits by this committer
- Mark DEPRECATED (no longer under development)

PR:             132122
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net> (maintainer)
1.5.1_1
16 Dec 2008 16:13:11
Original commit files touched by this commit
wxs search for other commits by this committer
- Mark as broken

PR:             ports/129597
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net> (maintainer)
1.5.1_1
08 Sep 2007 00:53:15
Original commit files touched by this commit
linimon search for other commits by this committer
Welcome bsd.perl.mk.  Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.

Work done by:   gabor
Sponsored by:   Google Summer of Code 2007
Hat:            portmgr
1.5.1_1
19 May 2007 20:32:57
Original commit files touched by this commit
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
1.5.1
02 May 2006 21:31:43
Original commit files touched by this commit
garga search for other commits by this committer
Bioperl-run contain modules that provides a PERL interface to various
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.

WWW: http://bioperl.org/

PR:             ports/93675
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net>

Number of commits found: 6