Port details
py-valerius Python bioinformatics tools
0.2_1 biology Σ 0.2_1Version of this port present on the latest quarterly branch. Maintainer: yuri@FreeBSD.org Port Added: 2022-10-04 04:09:26Last Update: 2025-03-08 04:05:21Commit Hash: 06a08e6 Also Listed In: python License: MITWWW: https://github.com/samirelanduk/valerius Description: # valerius is a simple Bioinformatics toolset for processing Biological sequences.
It can gfetch sequences from servers, detect their types, do FASTA parsing. Manual pages: # FreshPorts has no man page information for this port.
pkg-plist: make generate-plist # There is no configure plist information for this port. USE_RC_SUBR (Service Scripts)
no SUBR information found for this port
Dependency lines :
${PYTHON_PKGNAMEPREFIX}valerius>0:biology/py-valerius@${PY_FLAVOR} To install the port : # cd /usr/ports/biology/py-valerius/ && make install clean To add the package , run one of these commands: pkg install biology/py-valerius pkg install py311-valerius py311-valerius listed in the above command, you can pick from the names under the Packages section.PKGNAME: py311-valerius Package flavors (<flavor>: <package> ) # distinfo: # TIMESTAMP = 1664855237
SHA256 (samirelanduk-valerius-v0.2_GH0.tar.gz) = f4b206cd4e9ec56630f4f55a7064f7fbea302a8a6620cac832475c2260b917ab
SIZE (samirelanduk-valerius-v0.2_GH0.tar.gz) = 18486
Packages (timestamps in pop-ups are UTC): #
Dependencies # NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered. Build dependencies: #
py311-setuptools>=63.1.0 : devel/py-setuptools@py311 python3.11 : lang/python311
Test dependencies: #
python3.11 : lang/python311
Runtime dependencies: #
py311-requests>0 : www/py-requests@py311 python3.11 : lang/python311
This port is required by: # for Build #
science/py-atomium for Run #
science/py-atomium Configuration Options : # No options to configure Options name : # biology_py-valerius USES: # python
FreshPorts was unable to extract/find any pkg message # Master Sites: #
Number of commits found: 2 #
Commit History - (may be incomplete: for full details, see links to repositories near top of page) Commit Credits Log message 0.2_1 Charlie Li (vishwin) python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
Any missed ports, feel free to bump.
Any ports that need setuptools at runtime can have the devel/py-setuptools
manually added back to RUN_DEPENDS, but understand that this practice
is deprecated; see CHANGES for details. 0.2 Yuri Victorovich (yuri) biology/py-valerius: New port: Python bioinformatics tools
Number of commits found: 2
