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Port details on branch 2023Q2
unikmer Toolkit for nucleic acid k-mer analysis, set operations on k-mers
0.19.1_6 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.1_6Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-04-08 16:02:42
Last Update: 2023-04-08 15:33:05
Commit Hash: 95d3a8d
License: MIT
WWW:
https://github.com/shenwei356/unikmer
Description:
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers (sketch) optional with TaxIds but without count information. K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik. TaxIds can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
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  1. bin/unikmer
  2. /usr/local/share/licenses/unikmer-0.19.1_6/catalog.mk
  3. /usr/local/share/licenses/unikmer-0.19.1_6/LICENSE
  4. /usr/local/share/licenses/unikmer-0.19.1_6/MIT
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Dependency lines:
  • unikmer>0:biology/unikmer
To install the port:
cd /usr/ports/biology/unikmer/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/unikmer
  • pkg install unikmer
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: unikmer
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1679318811 SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 7b62d5cd96cb392e6b06bec08dc810fbe1dda7a2201e95e2ff04a3c631048347 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 1359

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SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = d2a25e1fb9eb1701de64f843de9653adf02bf343324c236d08f5d510d6c8e3d2 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = 4286117 SHA256 (go/biology_unikmer/unikmer-v0.19.1/golang-sys-v0.6.0_GH0.tar.gz) = b4f6d17c7a128f76169964b437cb66b3f2dbf9a33361928ec19dfecf7b03fc54 SIZE (go/biology_unikmer/unikmer-v0.19.1/golang-sys-v0.6.0_GH0.tar.gz) = 1434234

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No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go120 : lang/go120
Test dependencies:
  1. csvtk : science/csvtk
  2. perl5>=5.32.r0<5.33 : lang/perl5.32
Fetch dependencies:
  1. go120 : lang/go120
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_unikmer
USES:
go:modules perl5 zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://proxy.golang.org/github.com/shenwei356/unikmer/@v/
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Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.19.1_6
08 Apr 2023 15:33:05
commit hash: 95d3a8db15d8962f7839ab8406862a29f117d250commit hash: 95d3a8db15d8962f7839ab8406862a29f117d250commit hash: 95d3a8db15d8962f7839ab8406862a29f117d250commit hash: 95d3a8db15d8962f7839ab8406862a29f117d250 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go{119,120} update

Approved by: ports-secteam (blanket)

Number of commits found: 1
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