This module is an interface to the C Clustering Library, a general
purpose library implementing functions for hierarchical clustering
(pairwise simple, complete, average, and centroid linkage),
along with k-means and k-medians clustering, and 2D self-organizing maps.
The library is distributed along with Cluster 3.0, an enhanced version
of the famous Cluster program originally written by Michael Eisen
while at Stanford University. The C clustering library was written
by Michiel de Hoon.
This module is a Perl wrapper for the C clustering library for
cDNA microarray data, Copyright (C) 2002 Michiel Jan Laurens de Hoon.
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner)
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above )
devel: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* "Waitman Gobble" <uzimac@da3m0n8t3r.com>
* <jkoshy@FreeBSD.org>
* Aaron Dalton <aaron@FreeBSD.org>
* Aaron Dalton <aaron@daltons.ca>
* Aaron H. K. Diep <ahkdiep@gmail.com>
* Aaron Hurt <ahurt@anbcs.com>
* Abel Chow <abel_chow@yahoo.com>
* Adam McLaurin
* Adam Saponara <as@php.net>
* Adam Weinberger <adamw@FreeBSD.org>
* Ade Lovett <ade@FreeBSD.org>
(Only the first 15 lines of the commit message are shown above )
devel/p5-Algorithm-Cluster: fix build on i386
It's enough to simply use ld.bfd for linking, but ports framework forces ports
with USE_PERL5=configure to use ${CC} as LD.
Some OCD cleanups on some of the perl@ ports.
- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
the plist was randomized before committing
A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier.
Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:
site_perl : lib/perl5/site_perl/5.18
site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
perl_man3 : lib/perl5/5.18/man/man3
Now we have:
site_perl : lib/perl5/site_perl
site_arch : lib/perl5/site_perl/mach/5.18
perl_man3 : lib/perl5/site_perl/man/man3
Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above )
Remove all the bootstrap files (.bs) from the plists.
Starting with perl 5.20, they're not installed any more if empty,
and on FreeBSD, they're (always ?) empty.
PR: 190681
Submitted by: mat
Exp-Run by: antoine
Sponsored by: Absolight
- Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro.
See http://wiki.freebsd.org/Perl for details.
- Change maintainership from ports@ to perl@ for ports in this changeset.
- Remove MD5 checksum
search.cpan.org redirect reduction canonicalization project, pass 1:
URLs automatically rewritten from /search?dist=Foo or /dist/Foo
to /dist/Foo/ (note trailing slash). After a 2002(!) reorganization,
this is the preferred way to refer to modules on search.cpan.org.
This pass brought to you by http://people.freebsd.org/~fenner/fix-search
Add p5-Algorithm-Cluster 1.26,
This module is an interface to the C Clustering Library, a
general purpose library implementing functions for hierarchical
clustering (pairwise simple, complete, average, and centroid
linkage), along with k-means and k-medians clustering, and 2D
self-organizing maps. The library is distributed along with
Cluster 3.0, an enhanced version of the famous Cluster program
originally written by Michael Eisen while at Stanford
University. The C clustering library was written by Michiel de
Hoon.
PR: ports/66970
Submitted by: Cheng-Lung Sung <clsung@dragon2.net>
