| Port details |
- py-anndata Annotated data
- 0.12.14 devel
 =0      0.12.10Version of this port present on the latest quarterly branch. - Maintainer: sunpoet@FreeBSD.org
- Port Added: 2023-04-18 18:09:13
- Last Update: 2026-05-13 20:17:58
- Commit Hash: a2c09bd
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- https://anndata.readthedocs.io/en/stable/
- https://github.com/scverse/anndata
- Description:
- anndata is a Python package for handling annotated data matrices in memory and
on disk, positioned between pandas and xarray. anndata offers a broad range of
computationally efficient features including, among others, sparse data support,
lazy operations, and a PyTorch interface.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}anndata>0:devel/py-anndata@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/devel/py-anndata/ && make install clean
- To add the package, run one of these commands:
- pkg install devel/py-anndata
- pkg install py311-anndata
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py311-anndata listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py311-anndata
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1778677908
SHA256 (anndata-0.12.14.tar.gz) = 52c852246eae20b469753f51f1481e034fb15f5218878f8695fd0e111c4c6da1
SIZE (anndata-0.12.14.tar.gz) = 2255427
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py311-hatch-vcs>=0 : devel/py-hatch-vcs@py311
- py311-hatchling>=0 : devel/py-hatchling@py311
- python3.11 : lang/python311
- py311-build>=0 : devel/py-build@py311
- py311-installer>=0 : devel/py-installer@py311
- Test dependencies:
-
- python3.11 : lang/python311
- Runtime dependencies:
-
- py311-array-api-compat>=1.7.1 : devel/py-array-api-compat@py311
- py311-h5py>=3.8 : science/py-h5py@py311
- py311-legacy-api-wrap>=0 : devel/py-legacy-api-wrap@py311
- py311-natsort>=0 : devel/py-natsort@py311
- py311-numpy>=1.26,1 : math/py-numpy@py311
- py311-packaging>=24.2 : devel/py-packaging@py311
- py311-pandas>=2.1.0,1<3,1 : math/py-pandas@py311
- py311-pooch>=0 : devel/py-pooch@py311
- py311-scipy>=1.12 : science/py-scipy@py311
- py311-scverse-misc>=0.0.3 : devel/py-scverse-misc@py311
- py311-zarr>=2.18.4 : devel/py-zarr@py311
- python3.11 : lang/python311
- This port is required by:
- for Build
-
- math/py-mnnpy
- for Run
-
- biology/py-pydeseq2
- math/py-mnnpy
Configuration Options:- No options to configure
- Options name:
- devel_py-anndata
- USES:
- python:3.11+
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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