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Port details
py-pykdtree Fast kd-tree implementation with OpenMP-enabled queries
1.4.1 devel on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.3.13Version of this port present on the latest quarterly branch.
Maintainer: sunpoet@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-08-21 17:15:27
Last Update: 2025-04-09 14:55:11
Commit Hash: 150c001
People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py311-PyOpenGL, p5-Sane
Also Listed In: python
License: LGPL3
WWW:
https://github.com/storpipfugl/pykdtree
Description:
pykdtree is a kd-tree implementation for fast nearest neighbour search in Python. The aim is to be the fastest implementation around for common use cases (low dimensions and low number of neighbours) for both tree construction and queries. The implementation is based on scipy.spatial.cKDTree and libANN by combining the best features from both and focus on implementation efficiency. The interface is similar to that of scipy.spatial.cKDTree except only Euclidean distance measure is supported. Queries are optionally multithreaded using OpenMP.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}pykdtree>0:devel/py-pykdtree@${PY_FLAVOR}
To install the port:
cd /usr/ports/devel/py-pykdtree/ && make install clean
To add the package, run one of these commands:
  • pkg install devel/py-pykdtree
  • pkg install py311-pykdtree
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py311-pykdtree listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py311-pykdtree
Package flavors (<flavor>: <package>)
  • py311: py311-pykdtree
distinfo:
TIMESTAMP = 1742405488 SHA256 (pykdtree-1.4.1.tar.gz) = 10848ff6ac7332b68e65bf8c2e89667b6b62b075aad272347744a69bf1c8ad7e SIZE (pykdtree-1.4.1.tar.gz) = 28315

Packages (timestamps in pop-ups are UTC):
py39-pykdtree
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest--------
FreeBSD:13:quarterly--------
FreeBSD:14:latest--------
FreeBSD:14:quarterly--------
FreeBSD:15:latest--n/a-n/a--1.3.10
 

py311-pykdtree
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest1.3.131.3.13--1.3.13---
FreeBSD:13:quarterly1.3.131.3.13--1.3.13---
FreeBSD:14:latest1.3.131.4.1--1.4.1---
FreeBSD:14:quarterly1.3.131.3.13--1.3.13---
FreeBSD:15:latest1.3.131.3.13n/a-n/a---
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py311-numpy>=0,1 : math/py-numpy@py311
  2. py311-setuptools>=0 : devel/py-setuptools@py311
  3. py311-wheel>=0 : devel/py-wheel@py311
  4. py311-cython3>=3.0.12<3.1 : lang/cython3@py311
  5. python3.11 : lang/python311
  6. py311-build>=0 : devel/py-build@py311
  7. py311-installer>=0 : devel/py-installer@py311
Test dependencies:
  1. python3.11 : lang/python311
Runtime dependencies:
  1. py311-numpy>=0,1 : math/py-numpy@py311
  2. python3.11 : lang/python311
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
devel_py-pykdtree
USES:
python:3.9+
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/pykdtree/
  2. https://pypi.org/packages/source/p/pykdtree/
Collapse this list.

Number of commits found: 10

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.4.1
09 Apr 2025 14:55:11
commit hash: 150c0018fdfece47d43cc508378c8faf26046149commit hash: 150c0018fdfece47d43cc508378c8faf26046149commit hash: 150c0018fdfece47d43cc508378c8faf26046149commit hash: 150c0018fdfece47d43cc508378c8faf26046149 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
Mk/Uses/python.mk: Introduce USE_PYTHON=cython3{,_run,_test}

- Update USE_PYTHON=cython{,_run,_test}
- Convert all cython3 occurrence to USE_PYTHON=cython3*
- While I'm here, fix incorrect usage of combining cython3 in BUILD_DEPENDS and
USE_PYTHON=cython

It is added to simplify the future transition from Cython 0.29 to 3.

The minimal version is set to 3.0.12 because it is required by
devel/py-propcache.
The upper bound of version is set to 3.1 because it is limited by multiple
ports.
1.4.1
09 Apr 2025 13:55:13
commit hash: b14cecca149144c56c689ff4173157846e32df45commit hash: b14cecca149144c56c689ff4173157846e32df45commit hash: b14cecca149144c56c689ff4173157846e32df45commit hash: b14cecca149144c56c689ff4173157846e32df45 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.4.1

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.13
08 Sep 2024 18:37:34
commit hash: 80435a02822d3f5ecfd171135285bb9bb48ed9e0commit hash: 80435a02822d3f5ecfd171135285bb9bb48ed9e0commit hash: 80435a02822d3f5ecfd171135285bb9bb48ed9e0commit hash: 80435a02822d3f5ecfd171135285bb9bb48ed9e0 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.3.13

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.12
20 Apr 2024 18:28:24
commit hash: 10127c6ab04394095429e9da4b5041c926395a8bcommit hash: 10127c6ab04394095429e9da4b5041c926395a8bcommit hash: 10127c6ab04394095429e9da4b5041c926395a8bcommit hash: 10127c6ab04394095429e9da4b5041c926395a8b files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.3.12

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.11
09 Mar 2024 14:06:03
commit hash: 259edf1dc7a40f7b1662a029aa542bc4215cc118commit hash: 259edf1dc7a40f7b1662a029aa542bc4215cc118commit hash: 259edf1dc7a40f7b1662a029aa542bc4215cc118commit hash: 259edf1dc7a40f7b1662a029aa542bc4215cc118 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.3.11

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.10
21 Feb 2024 15:07:42
commit hash: 01ac11f29c9581a42d28dc881817e1690c64e638commit hash: 01ac11f29c9581a42d28dc881817e1690c64e638commit hash: 01ac11f29c9581a42d28dc881817e1690c64e638commit hash: 01ac11f29c9581a42d28dc881817e1690c64e638 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Fix build with cython 0.29.37+
1.3.10
17 Feb 2024 06:05:56
commit hash: 65c297ff419623cc0bb4cdc2f35ddb551f32699bcommit hash: 65c297ff419623cc0bb4cdc2f35ddb551f32699bcommit hash: 65c297ff419623cc0bb4cdc2f35ddb551f32699bcommit hash: 65c297ff419623cc0bb4cdc2f35ddb551f32699b files touched by this commit
Muhammad Moinur Rahman (bofh) search for other commits by this committer
devel/py-pykdtree: mark BROKEN

Backend subprocess exited when trying to invoke build_wheel
1.3.10
01 Dec 2023 22:11:44
commit hash: 3175703fdb3023fe9adfff09eff99e9a5b122bb3commit hash: 3175703fdb3023fe9adfff09eff99e9a5b122bb3commit hash: 3175703fdb3023fe9adfff09eff99e9a5b122bb3commit hash: 3175703fdb3023fe9adfff09eff99e9a5b122bb3 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.3.10

- Convert to USE_PYTHON=pep517

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.9
11 Oct 2023 12:58:00
commit hash: 2b9e5e069d8dc6524e6beeb3968e438f470eca48commit hash: 2b9e5e069d8dc6524e6beeb3968e438f470eca48commit hash: 2b9e5e069d8dc6524e6beeb3968e438f470eca48commit hash: 2b9e5e069d8dc6524e6beeb3968e438f470eca48 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Update to 1.3.9

Changes:	https://github.com/storpipfugl/pykdtree/releases
1.3.7.post0
21 Aug 2023 17:01:58
commit hash: 7b98bdd020b1fa27dd7273303461332eb3010682commit hash: 7b98bdd020b1fa27dd7273303461332eb3010682commit hash: 7b98bdd020b1fa27dd7273303461332eb3010682commit hash: 7b98bdd020b1fa27dd7273303461332eb3010682 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
devel/py-pykdtree: Add py-pykdtree 1.3.7.post0

pykdtree is a kd-tree implementation for fast nearest neighbour search in
Python. The aim is to be the fastest implementation around for common use cases
(low dimensions and low number of neighbours) for both tree construction and
queries.

The implementation is based on scipy.spatial.cKDTree and libANN by combining the
best features from both and focus on implementation efficiency.

The interface is similar to that of scipy.spatial.cKDTree except only Euclidean
distance measure is supported.

Queries are optionally multithreaded using OpenMP.

Number of commits found: 10