| Port details |
- py-tifffile Read and write TIFF(r) files
- 2025.2.18 graphics
 =2      2024.12.12Version of this port present on the latest quarterly branch. - Maintainer: sunpoet@FreeBSD.org
- Port Added: 2020-10-10 07:44:01
- Last Update: 2025-02-20 07:59:07
- Commit Hash: 2a60a61
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- https://github.com/cgohlke/tifffile
- Description:
- Tifffile is a Python library to
- store numpy arrays in TIFF (Tagged Image File Format) files, and
- read image and metadata from TIFF-like files used in bioimaging.
Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
NIHImage, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS,
ZIF (Zoomable Image File Format), QPTIFF (QPI), NDPI, and GeoTIFF files.
Image data can be read as numpy arrays or zarr arrays/groups from strips, tiles,
pages (IFDs), SubIFDs, higher order series, and pyramidal levels.
Numpy arrays can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack
compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled,
predicted, or compressed form.
A subset of the TIFF specification is supported, mainly 8, 16, 32 and 64-bit
integer, 16, 32 and 64-bit float, grayscale and multi-sample images.
Specifically, CCITT and OJPEG compression, chroma subsampling without JPEG
compression, color space transformations, samples with differing types, or IPTC
and XMP metadata are not implemented.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}tifffile>0:graphics/py-tifffile@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/graphics/py-tifffile/ && make install clean
- To add the package, run one of these commands:
- pkg install graphics/py-tifffile
- pkg install py311-tifffile
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py311-tifffile listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py311-tifffile
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1739962482
SHA256 (tifffile-2025.2.18.tar.gz) = 8d731789e691b468746c1615d989bc550ac93cf753e9210865222e90a5a95d11
SIZE (tifffile-2025.2.18.tar.gz) = 365412
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py311-setuptools>=0 : devel/py-setuptools@py311
- py311-wheel>=0 : devel/py-wheel@py311
- python3.11 : lang/python311
- py311-build>=0 : devel/py-build@py311
- py311-installer>=0 : devel/py-installer@py311
- Test dependencies:
-
- python3.11 : lang/python311
- Runtime dependencies:
-
- py311-numpy>=0,1 : math/py-numpy@py311
- python3.11 : lang/python311
- This port is required by:
- for Run
-
- graphics/py-scikit-image
- math/py-mathics
- www/py-sentinelhub
Configuration Options:- ===> The following configuration options are available for py311-tifffile-2025.2.18:
CODECS=off: Codec for compression and predictor schemes
PLOT=off: Plotting support
XML=off: Validate and print XML
ZARR=off: Access zarr store
===> Use 'make config' to modify these settings
- Options name:
- graphics_py-tifffile
- USES:
- dos2unix python:3.10+
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
2025.2.18
20 Feb 2025 07:59:07
 |
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2025.2.18
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2025.1.10
03 Feb 2025 15:51:26
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2025.1.10
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.12.12
25 Dec 2024 19:15:43
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.12.12
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.9.20
06 Nov 2024 15:17:35
|
Robert Clausecker (fuz) |
filesystems: add new category for file systems and related utilities
The filesystems category houses file systems and file system utilities.
It is added mainly to turn the sysutils/fusefs-* pseudo-category into
a proper one, but is also useful for the sundry of other file systems
related ports found in the tree.
Ports that seem like they belong there are moved to the new category.
Two ports, sysutils/fusefs-funionfs and sysutils/fusefs-fusepak are
not moved as they currently don't fetch and don't have TIMESTAMP set
in their distinfo, but that is required to be able to push a rename
of the port by the pre-receive hook.
Approved by: portmgr (rene)
Reviewed by: mat
Pull Request: https://github.com/freebsd/freebsd-ports/pull/302
PR: 281988 |
2024.9.20
30 Sep 2024 13:36:34
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.9.20
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.8.30
08 Sep 2024 18:37:42
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.8.30
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.8.10
05 Sep 2024 06:18:01
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.8.10
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.7.24
25 Jul 2024 04:18:20
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Add CODECS, PLOT, XML and ZARR options |
2024.7.24
24 Jul 2024 21:16:32
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.7.24
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.7.21
24 Jul 2024 11:44:50
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.7.21
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.7.2
07 Jul 2024 17:21:04
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.7.2
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.5.22
28 May 2024 10:21:35
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.5.22
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.5.10
19 May 2024 17:15:49
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.5.10
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.4.18
20 Apr 2024 18:28:29
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.4.18
- Add GitHub to MASTER_SITES
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2024.2.12
13 Apr 2024 09:31:41
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2024.2.12
- Convert to USE_PYTHON=pep517
Changes: https://github.com/cgohlke/tifffile/releases
https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2023.4.12
27 Jun 2023 19:34:34
|
Rene Ladan (rene) |
all: remove explicit versions in USES=python for "3.x+"
The logic in USES=python will automatically convert this to 3.8+ by
itself.
Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.
finance/quickfix: mark BROKEN with PYTHON
libtool: compile: c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
^~~~~~~~~~
1 warning and 1 error generated.
Reviewed by: portmgr, vishwin, yuri
Differential Revision: <https://reviews.freebsd.org/D40568> |
2023.4.12
27 May 2023 04:09:16
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2023.4.12
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2022.7.28_1
23 Apr 2023 09:09:58
|
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
2022.7.28
11 Jan 2023 15:58:34
|
Dmitry Marakasov (amdmi3) |
*/*: rename CHEESESHOP to PYPI in MASTER_SITES
PR: 267994
Differential revision: D37518
Approved by: bapt |
07 Sep 2022 21:58:51
|
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
2022.7.28
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
2022.7.28
27 Aug 2022 10:24:39
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2022.7.28
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2022.5.4
20 Jul 2022 14:22:04
|
Tobias C. Berner (tcberner) |
graphics: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* "Waitman Gobble" <uzimac@da3m0n8t3r.com>
* Aaron Dalton <aaron@FreeBSD.org>
* Abel Chow <ozsanh45vds001@sneakemail.com>
* Adam Weinberger <adamw@FreeBSD.org>
* Ade Lovett <ade@FreeBSD.org>
* Ade Lovett <ade@lovett.com>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Aldis Berjoza <aldis@bsdroot.lv>
* Alex Hayward <xelah@xelah.com>
* Alex Ivasyuv <siegerstein@pochta.ru>
* Alex Samorukov <samm@os2.kiev.ua> (Only the first 15 lines of the commit message are shown above ) |
2022.5.4
16 Jun 2022 13:59:54
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2022.5.4
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2022.3.25
30 Mar 2022 23:49:01
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2022.3.25
tifffile drops official Python 3.7 support since 2022.2.2, but it still builds
fine.
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.11.2
28 Feb 2022 12:46:21
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2021.11.2
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.8.30
27 Sep 2021 15:56:00
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2021.8.30
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.7.2
21 Jul 2021 18:11:54
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2021.7.2
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.6.14
20 Jun 2021 20:46:14
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2021.6.14
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.4.8
11 May 2021 21:47:16
|
Po-Chuan Hsieh (sunpoet) |
graphics/py-tifffile: Update to 2021.4.8
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.2.1
06 Apr 2021 14:31:07
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
2021.2.1
06 Feb 2021 20:46:42
 |
sunpoet |
Update to 2021.2.1
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2021.1.14
30 Jan 2021 12:24:56
|
sunpoet |
Update to 2021.1.14
Changes: https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst |
2020.10.1
10 Oct 2020 07:43:48
|
sunpoet |
Add py-tifffile 2020.10.1
Tifffile is a Python library to
- store numpy arrays in TIFF (Tagged Image File Format) files, and
- read image and metadata from TIFF-like files used in bioimaging.
Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
NIHImage, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS,
ZIF (Zoomable Image File Format), QPTIFF (QPI), NDPI, and GeoTIFF files.
Image data can be read as numpy arrays or zarr arrays/groups from strips, tiles,
pages (IFDs), SubIFDs, higher order series, and pyramidal levels.
Numpy arrays can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack
compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled,
predicted, or compressed form.
A subset of the TIFF specification is supported, mainly 8, 16, 32 and 64-bit
integer, 16, 32 and 64-bit float, grayscale and multi-sample images.
Specifically, CCITT and OJPEG compression, chroma subsampling without JPEG
compression, color space transformations, samples with differing types, or IPTC
and XMP metadata are not implemented.
WWW: https://github.com/cgohlke/tifffile |
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