Raster3D is a set of tools for generating high quality raster images of
proteins or other molecules.
The core program renders spheres, triangles, cylinders, and quadric
surfaces with specular highlighting, Phong shading, and shadowing. It
uses an efficient software Z-buffer algorithm which is independent of
any graphics hardware.
Ancillary programs process atomic coordinates from PDB files into
rendering descriptions for pictures composed of ribbons, space-filling
atoms, bonds, ball+stick, etc.
Raster3D can also be used to render pictures composed in other programs
such as Molscript in glorious 3D with highlights, shadowing, etc. Output
is to pixel image files with 24 bits of color information per pixel.
===> The following configuration options are available for raster3d-3.0.7_5:
DOCS=on: Build and/or install documentation
EXAMPLES=on: Build and/or install examples
IMAGEMAGICK=on: ImageMagick image processing support
===> Use 'make config' to modify these settings
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner)
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above )
graphics: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* "Waitman Gobble" <uzimac@da3m0n8t3r.com>
* Aaron Dalton <aaron@FreeBSD.org>
* Abel Chow <ozsanh45vds001@sneakemail.com>
* Adam Weinberger <adamw@FreeBSD.org>
* Ade Lovett <ade@FreeBSD.org>
* Ade Lovett <ade@lovett.com>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Aldis Berjoza <aldis@bsdroot.lv>
* Alex Hayward <xelah@xelah.com>
* Alex Ivasyuv <siegerstein@pochta.ru>
* Alex Samorukov <samm@os2.kiev.ua>
(Only the first 15 lines of the commit message are shown above )
framework: Add new USES 'magick' for graphics/ImageMagick*
A new USES has been added to depend on ImageMagick.
USES=magick
adds a LIB_DEPENDS on graphics/ImageMagick${IMAGEMAGICK_DEFAULT}.
If a specific version is required, use for example
USES=magick:6 resp. USES=magick:7
If only a build, run or test is required, use for example
USES=magick:build resp. USES=magick:6,build,test
(Only the first 15 lines of the commit message are shown above )
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.
Suggested by: tijl
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
Update ImageMagick to 6.9.10.14 [1]
* Add PKGNAMESUFFIX and rename the directory. This was done to show
that IM6 is not the "main" version. But still fully supported by upstream.
* Convert a number of options to optionhelpers.
* Add option for ISO/IEC 23008-12:2017 HEIF suport
* Add comment to pkg-descr explaining IM6's "legacy" tag.
* Add comment to the patch-config_policy.xml file why it still needed.
Please note that IM7 is not a drop in replacement due to library API and
command arguments changes. And as a result ports need to decide for themself
which version to use.
Chase these changes in all the ports that using IM6.
PR: 225102 (based on, only the version update) [1]
Submitted by: Pascal Christen <pascal.christen@hostpoint.ch>
graphics/raster3d: Fix dependencies: it wasn't using dependencies before
Makefile.incl was generated in the same 'make' run as build and was ignored by
'make'.
Separating its generation and use makes raster3d to use dependencies.
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.
This includes ports
- featuring USE_GCC=yes or USE_GCC=any,
- featuring USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and those
- with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.
PR: 222542
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
c++14-lang, c++0x, c11, or gcc-c++11-lib.
PR: 219275
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using using Mk/bsd.octave.mk which in turn has USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
c++11-lang, c++0x, c11, or gcc-c++11-lib.
PR: 216707
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.
The first part covered ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.
PR: 214965
Reported by: thierry
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit)
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.
Part II, Bump PORTREVISIONs.
PR: 182136
Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by: bdrewery (two -exp runs)
Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
- #14669: Fixed extraction of CC from gmp.h.
- Fixed case of intermediate zero real or imaginary part in mpc_fma,
found by hydra with GMP_CHECK_RANDOMIZE=1346362345.
This is on top of the following changes from version 1.0
- Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
invariant sections) for the documentation.
- 100% of all lines are covered by tests
- Renamed functions
. mpc_mul_2exp to mpc_mul_2ui
. mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above )
Now we use USE_FORTRAN=yes to use FORTRAN compiler.
> If I haven't done it by Monday, you may commit it yourself.
Now Monday is over in Shaun's timezone and mine as well :)
Approved by: maintainer
Update distinfo to reflect re-rolled distfile, and add another master
site location for the previous file.
The changes are trivial and don't appear to affect us, so no
PORTREVISION bump.
