Port details |
- R-cran-NMF Algorithms and Framework for Nonnegative Matrix Factorization
- 0.28 math =2 0.27Version of this port present on the latest quarterly branch.
- Maintainer: bofh@FreeBSD.org
- Port Added: 2015-08-11 19:50:48
- Last Update: 2024-08-27 10:12:31
- Commit Hash: 9513a92
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- License: GPLv2+
- WWW:
- https://cran.r-project.org/web/packages/NMF/
- Description:
- Provides a framework to perform Non-negative Matrix Factorization
(NMF). The package implements a set of already published algorithms
and seeding methods, and provides a framework to test, develop and
plug new/custom algorithms. Most of the built-in algorithms have
been optimized in C++, and the main interface function provides an
easy way of performing parallel computations on multicore machines.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- R-cran-NMF>0:math/R-cran-NMF
- To install the port:
- cd /usr/ports/math/R-cran-NMF/ && make install clean
- To add the package, run one of these commands:
- pkg install math/R-cran-NMF
- pkg install R-cran-NMF
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: R-cran-NMF
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1724745393
SHA256 (NMF_0.28.tar.gz) = 77dfe7b323ee5e5f8801851d1d4356932e2ffc810a7ac7faf5542cbfd92eeefb
SIZE (NMF_0.28.tar.gz) = 1678046
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- R-cran-pkgmaker>=0.20 : devel/R-cran-pkgmaker
- R-cran-registry>0 : devel/R-cran-registry
- R-cran-rngtools>=1.2.3 : devel/R-cran-rngtools
- R-cran-stringr>=1.0.0 : textproc/R-cran-stringr
- R-cran-digest>0 : security/R-cran-digest
- R-cran-gridBase>0 : graphics/R-cran-gridBase
- R-cran-colorspace>0 : graphics/R-cran-colorspace
- R-cran-RColorBrewer>0 : graphics/R-cran-RColorBrewer
- R-cran-foreach>0 : devel/R-cran-foreach
- R-cran-doParallel>0 : devel/R-cran-doParallel
- R-cran-ggplot2>0 : graphics/R-cran-ggplot2
- R-cran-reshape2>0 : devel/R-cran-reshape2
- R-cran-BiocManager>0 : biology/R-cran-BiocManager
- R-cran-Biobase>0 : biology/R-cran-Biobase
- R : math/R
- gfortran13 : lang/gcc13
- as : devel/binutils
- Runtime dependencies:
-
- R-cran-pkgmaker>=0.20 : devel/R-cran-pkgmaker
- R-cran-registry>0 : devel/R-cran-registry
- R-cran-rngtools>=1.2.3 : devel/R-cran-rngtools
- R-cran-stringr>=1.0.0 : textproc/R-cran-stringr
- R-cran-digest>0 : security/R-cran-digest
- R-cran-gridBase>0 : graphics/R-cran-gridBase
- R-cran-colorspace>0 : graphics/R-cran-colorspace
- R-cran-RColorBrewer>0 : graphics/R-cran-RColorBrewer
- R-cran-foreach>0 : devel/R-cran-foreach
- R-cran-doParallel>0 : devel/R-cran-doParallel
- R-cran-ggplot2>0 : graphics/R-cran-ggplot2
- R-cran-reshape2>0 : devel/R-cran-reshape2
- R-cran-BiocManager>0 : biology/R-cran-BiocManager
- R-cran-Biobase>0 : biology/R-cran-Biobase
- R : math/R
- gfortran13 : lang/gcc13
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- math_R-cran-NMF
- USES:
- cran:auto-plist,compiles
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
0.28 27 Aug 2024 10:12:31 |
Muhammad Moinur Rahman (bofh) |
math/R-cran-NMF: Update version 0.27=>0.28
Changelog: https://cran.r-project.org/web/packages/NMF/ |
0.27 10 Feb 2024 19:06:41 |
Muhammad Moinur Rahman (bofh) |
math/R-cran-NMF: Update version 0.26=>0.27
Changelog: https://cran.r-project.org/web/packages/NMF/ |
0.26 15 Dec 2023 12:55:44 |
Muhammad Moinur Rahman (bofh) |
math/R-cran-NMF: Update version 0.21.0=>0.26
- Adopt port
Changelog: https://cran.r-project.org/web/packages/NMF/ |
0.21.0_4 07 May 2023 05:57:10 |
TAKATSU Tomonari (tota) |
math/R-cran-NMF: Mark BROKEN
- Mark BROKEN: does not build with the follwing error
utils.cpp:118:20: error: use of undeclared identifier 'DOUBLE_EPS'
double eps = sqrt(DOUBLE_EPS);
^
- Drop maintainership
Reported by: pkg-fallout |
0.21.0_4 23 Apr 2023 09:09:58 |
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
07 Sep 2022 21:58:51 |
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
0.21.0_3 07 Sep 2022 21:10:59 |
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above ) |
0.21.0_3 20 Jul 2022 14:22:24 |
Tobias C. Berner (tcberner) |
math: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Aaron Dalton <aaron@daltons.ca>
* Alessando Sagratini <ale_sagra@hotmail.com>
* Alex Dupre <ale@FreeBSD.org>
* Alexey Dokuchaev <danfe@FreeBSD.org>
* Amarendra Godbole <amarendra.godbole@gmail.com>
* Anders Nordby <anders@FreeBSD.org>
* Andreas Fehlner (fehlner@gmx.de)
* Andrew L. Neporada <andrew@chg.ru>
* Andrey <gugu@zoo.rambler.ru>
* Andrey Zakhvatov (Only the first 15 lines of the commit message are shown above ) |
0.21.0_3 06 Apr 2021 14:31:07 |
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
0.21.0_3 05 May 2020 16:07:54 |
jrm |
math/R: Update to version 4.0.0
Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html
Also bump PORTREVISION of ports that depend on math/R.
Submitted by: wen (in part)
Reviewed by: jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision: https://reviews.freebsd.org/D24572 |
0.21.0_2 26 Jul 2019 20:46:57 |
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
0.21.0_1 12 Dec 2018 01:35:36 |
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
0.21.0 23 Mar 2018 11:27:46 |
tota |
- Update to 0.21.0
- Fix LICENSE section |
0.20.6_2 10 Mar 2018 17:46:06 |
gerald |
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079). |
0.20.6_1 18 Jun 2017 18:09:17 |
dbn |
qa: add check for NO_ARCH
If NO_ARCH is set then check that no FreeBSD elf(5) files are in $STAGEDIR.
If an elf(5) file is bundles as part of the package, but is not meant to be
run directly (i.e. the elf(5) file is a payload, and not compiled) then
those files can be added to NO_ARCH_IGNORE to avoid the check from failing,
Changes to ports:
- Ports that have NO_ARCH set, but actually compile files have had NO_ARCH
removed.
- Ports that have elf(5) payloads have had those files added to
NO_ARCH_IGNORE.
- R-cran ports that do not set USES=cran:compiles have NO_ARCH set,
PR: 218976
Reviewed by: antoine, mat
Approved by: portmgr |
0.20.6 01 Apr 2016 14:16:20 |
mat |
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.
With hat: portmgr
Sponsored by: Absolight |
0.20.6 11 Aug 2015 19:50:40 |
tota |
- Add new port: math/R-cran-NMF
Provides a framework to perform Non-negative Matrix Factorization
(NMF). The package implements a set of already published algorithms
and seeding methods, and provides a framework to test, develop and
plug new/custom algorithms. Most of the built-in algorithms have
been optimized in C++, and the main interface function provides an
easy way of performing parallel computations on multicore machines.
WWW: https://cran.r-project.org/web/packages/NMF/ |