Remove non staged ports without pending PR from ma*

Repair instances, almost all courtesy of bf ;-), of spaces
and/or tabs before the =. This made doing regular expressions
on the ports tree really difficult.

Approved by:	portmgr (not really, but touches unstaged ports)

Reset maintainership for ports not staged with no pending PR

With hat:	portmgr

Modernize LIB_DEPENDS

With hat:	portmgr

Fixup for USES=fortran conversion.  These ports require USE_GCC=yes
because they depend on gcc specific optimisation flags.

While here use USES=tar:bzip2.

PR:		ports/187501
Submitted by:	Christoph Moench-Tegeder <cmt@burggraben.net>

Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)

Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes".  In most cases
USE_GCC=yes has been omitted though.

Remove USE_FORTRAN handling from bsd.port.mk and bsd.gcc.mk.

Minor cleanups in some ports like USE_GMAKE, NOPORTDOCS,...

Exp-run:	bdrewery
Approved by:	portmgr (bdrewery)

Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui

Add NO_STAGE all over the place in preparation for the staging support (cat:
math)

add some CONFLICTS [1]; minor clean-up

Reported by:    S.-M. Silber [1]

steer users toward math/atlas while this port is being revised

Assume maintainership: the former maintainer
is busy

Approved by:    maho

- Get Rid MD5 support

Add conflict line.

Submitted by:   "b. f." <bf1783@googlemail.com>

Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
implies lang/gcc44 up from lang/gcc43.

Approved by:    portmgr

- Switch SourceForge ports to the new File Release System: categories starting
with M

Update to 3.9.11.

Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.

Use MANUAL_PACKAGE_BUILD instead. Portlint.

Marked as ignore. math/atlas is newer.

Update to 3.7.37 and unbreak.

Temporary marked as broken. Creating ATLAS'ed LAPACK part is now broken.

In ATLAS/INSTALL.txt it is said that gcc42 is superior to both gcc3 and gcc41
- and FreeBSD 7 current imported gcc42.

Spotted by:     Li-Lun \"Leland\" Wang" <llwang@infor.org>

Update to 3.7.34.

Now we use USE_FORTRAN=yes to use FORTRAN compiler.

Update to 3.7.29.

Update to 3.7.28.

Remove CONFLICT line as elmer-mathlibs are deprecated by migration
to gfortran.

No longer depended on g2c.h in the base.
Now we should use f2c.

gmake is needed as a build dependency.

Approved by:    maho

* Non threaded version installed actually threaded version.
* bump port revision.

* Do not install libtstatlas* as they are not use frequently.
* Bump portrevision.

BLAS and LAPACK are now build with gfortran so test
section is also available as default.

* Shared lib number has been bumped 1 to 2
* Bump port revision

* Migrate to gfortran.
* portlint.
* (option) Installing benchmark tests for real FLOPS.
* Bump portrevision.

Update to 3.7.24.

Fix error when WITH_OPTIMIZED_FLAGS is specified.

PR:             100991
Submitted by:   Masayuki Takemura <ICG04984@nifty.com>

A better WITH_OPTIMIZED_FLAGS.

Remove USE_REINPLACE from ports starting with M

Register conflicts with math/elmer-mathlibs.

Submitted by:   thierry and
                Pedro F. Giffuni <giffunip@asme.org>

Cosmetic change

o Do not build static libraries in default setting; this reduce the
  build time by half.
o Add support for Pentium D
o timing_torerance patch is now activated via knob; this significantly
  reduce the build time.

A lot of discussion with: "Pedro F. Giffuni" <giffunip@yahoo.com>

SHA256ify

Approved by: krion@

Currently with "cpu I686_CPU" which is default,
kernel automatically enables SSE if it is available.
so remove messages which are not necessary.

Submitted by:    Darrien <darrien.l@gmail.com>

1. Update to 3.7.11
2. Add cputype of sempron; athlon type CPU

Submitted by:   edwin[1], Pedro A M Vazquez <vazquez@iqm.unicamp.br>[2]

Update to 3.7.10

Add two patches for stable builds.
o L1 cache size is not correctly detected having a bad clock
o in some case small number of tries in tuning doesn't meet convergence
  see FAQ http://math-atlas.sourceforge.net/errata.html#tol

At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.

Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.

Add a warning message

Suggested by: Rob D. <162144@gmail.com>

Reduce optimization level so that not get trapped
at infinite loop

Forced commit
Actually this report was submitted by mharo,
and eik kindly told me how to fix.

PR:     71095
Submitted by:   mharo

Avoid the use of != statements in ports Makefile

PR:             71095
Submitted by:   eik

Adding newline at the end of files
(lapack.h and blas.h)

Submitted by:   thierry@

Increase USE_GCC to 3.4 for those ports which compile with it.

Approved by:    portmgr

type -> arch

Pointy hat to: maho

ad hoc fix for 5-STABLE, having CPU
other than Pentium4 (Opteron, Pentium III,
Athlon... etc) this was due to recent change
in make(1)

Build fix for 5-STABLE

o Significantly performance loss by overriding several
  optimization flags...
o update to 3.7.8

1) correct the names of shared libs for threaded version
2) Some Pentium 4 series have more caches (not 512kB, but 1M ~ 2M)

Update to 3.7.5

Make portlint happy by replacing space to tab

PR:             65409
Submitted by:   trevor

forgot to update distinfo

Submitted by:   Kay Lehmann <kay_lehmann@web.de>

make portlint happy

real fix for PR:64692

PR:             64692
Submitted by:   Kay Lehmann <kay_lehmann@web.de>

Do not hardcord PICFLAG
Submitted by:   ru

Backout previous change of PICFLAG, since
behaviour of -fPIC and -fpic are different.
Here is the comment form obrien:

--
"-fpic" is a [minor?] optimization for machines that can handle it:

  -fpic
    Generate position-independent code (PIC) suitable for use in a shared
    library, if supported for the target machine. Such code accesses all
    constant addresses through a global offset table (GOT). The dynamic
    loader resolves the GOT entries when the program starts (the dynamic
    loader is not part of GCC; it is part of the operating system). If
    the GOT size for the linked executable exceeds a machine-specific
    maximum size, you get an error message from the linker indicating

-fPIC is appropreate on all architectures.

Submitted by: kris

Fix build on alpha 4-stable

Submitted by:   kris via bento

Update to 3.7.1

1) possible build fix on ia64 archs
2) remove some make xconfig
3) move PKGNAMESUFFIX appropreate position

PR:             61995
Submitted by:   hrs

Add NO_PACKAGE since this port is heavely depended on
the environment.

Submitted by:   sf
Many thanks to: sf

Fix broken on alpha

Submitted by:   kris via bento

Add more architectures (result of hw.model)

thanks for your reports!
Norikatsu Shigemura <nork@cityfujisawa.ne.jp>
SHINODA Masanori <shinoda@hiroshima.intec.co.jp>
FUJISHIMA Satsuki <sf@FreeBSD.org>
SATOH Mitsuharu <mituharu@rd.ikegami.co.jp>
nakayama <y.naka@gamma.ocn.ne.jp>
TSUCHIKAMA Shinji <tsuchikm@ff.iij4u.or.jp>
akira noda <a-noda@jaist.ac.jp>
Masahiro Yamagishi <night@pluto.dti.ne.jp>

Remove harmful message from Makefile

Pointed out by: sf

Remove # to compile

Pointy hat to: myself

a) update to 3.6.0
b) make PIC object files for amd64
c) some clean ups

a) Update to 3.5.22
b) added Opteron support but my machine is very unstable :(

Update to 3.5.12

Add new port atlas-devel, developer version of math/atlas