Port details |
- py-pyodesys Straightforward numerical integration of ODE systems from Python
- 0.14.4 math =2 0.14.4Version of this port present on the latest quarterly branch.
- Maintainer: yuri@FreeBSD.org
- Port Added: 2018-04-01 10:12:00
- Last Update: 2024-05-27 08:06:47
- Commit Hash: 6026640
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- Also Listed In: python
- License: BSD2CLAUSE
- WWW:
- https://github.com/bjodah/pyodesys
- Description:
- pyodesys provides a straightforward way of numerically integrating systems of
ordinary differential equations (initial value problems). It unifies the
interface of several libraries for performing the numerical integration as well
as several libraries for symbolic representation. It also provides a convenience
class for representing and integrating ODE systems defined by symbolic
expressions, e.g. SymPy expressions. This allows the user to write concise code
and rely on pyodesys to handle the subtle differences between libraries.
The numerical integration is performed using either:
* scipy.integrate.ode
* pygslodeiv2
* pyodeint
* pycvodes
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}pyodesys>0:math/py-pyodesys@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/math/py-pyodesys/ && make install clean
- To add the package, run one of these commands:
- pkg install math/py-pyodesys
- pkg install py39-pyodesys
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above. NOTE: This is a Python port. Instead of py39-pyodesys listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-pyodesys
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1716788057
SHA256 (pyodesys-0.14.4.tar.gz) = 584e3b8e6c5c633d964d8c6c9c865d348497bf71048de69dd601b65b8d6b882e
SIZE (pyodesys-0.14.4.tar.gz) = 107851
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- Xvfb : x11-servers/xorg-server@xvfb
- 8x13O.pcf.gz : x11-fonts/xorg-fonts-miscbitmaps
- fonts.alias : x11-fonts/font-alias
- base : x11/xkeyboard-config
- xkbcomp : x11/xkbcomp
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- matrix.hpp : devel/boost-libs
- gsl_errno.h : math/gsl
- py39-pytest>=7,1 : devel/py-pytest@py39
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-matplotlib>=2.2.5 : math/py-matplotlib@py39
- py39-numpy>=1.16,1<1.26,1 : math/py-numpy@py39
- py39-notebook>=5.7.8 : www/py-notebook@py39
- py39-scipy>=1.2.3 : science/py-scipy@py39
- py39-sym>=0.3.4 : math/py-sym@py39
- py39-sympy>=1.5.1 : math/py-sympy@py39
- py39-appdirs>0 : devel/py-appdirs@py39
- py39-pycodeexport>=0.1.2 : devel/py-pycodeexport@py39
- py39-pycompilation>=0.4.9 : devel/py-pycompilation@py39
- py39-pygslodeiv2>=0.9.1 : math/py-pygslodeiv2@py39
- py39-pyodeint>=0.10.1 : math/py-pyodeint@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Build
-
- science/py-chempy
- for Run
-
- science/py-chempy
Configuration Options:
- ===> The following configuration options are available for py39-pyodesys-0.14.4:
EXTRAS=on: Install optional dependencies for additional functionality
===> Use 'make config' to modify these settings
- Options name:
- math_py-pyodesys
- USES:
- display:test localbase:ldflags python shebangfix
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
0.14.4 27 May 2024 08:06:47 |
Yuri Victorovich (yuri) |
math/py-pyodesys: update 0.14.3 → 0.14.4
Reported by: portscout |
0.14.3_1 20 May 2024 10:33:03 |
Vsevolod Stakhov (vsevolod) |
security/libsodium: update to 1.0.19, bump dependent ports
PR: 278259
Reported by: Andrey Korobkov <alster-vinterdalen.se> |
0.14.3 25 Apr 2024 14:52:10 |
Yuri Victorovich (yuri) |
math/py-pyodesys: update 0.14.2 → 0.14.3
Reported by: portscout |
0.14.2 27 Jun 2023 19:34:34 |
Rene Ladan (rene) |
all: remove explicit versions in USES=python for "3.x+"
The logic in USES=python will automatically convert this to 3.8+ by
itself.
Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.
finance/quickfix: mark BROKEN with PYTHON
libtool: compile: c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
^~~~~~~~~~
1 warning and 1 error generated.
Reviewed by: portmgr, vishwin, yuri
Differential Revision: <https://reviews.freebsd.org/D40568> |
0.14.2 19 Jun 2023 19:01:08 |
Yuri Victorovich (yuri) |
math/py-pyodesys: Update 0.14.1 → 0.14.2
Reported by: portscout |
0.14.1_1 23 Apr 2023 09:09:58 |
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
0.14.1 11 Jan 2023 15:58:34 |
Dmitry Marakasov (amdmi3) |
*/*: rename CHEESESHOP to PYPI in MASTER_SITES
PR: 267994
Differential revision: D37518
Approved by: bapt |
0.14.1 23 Oct 2022 07:52:31 |
Yuri Victorovich (yuri) |
math/py-pyodesys: Minor correction and comment addition |
07 Sep 2022 21:58:51 |
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
0.14.1 07 Sep 2022 21:10:59 |
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above ) |
0.14.1 27 Apr 2022 11:42:12 |
Dmitry Marakasov (amdmi3) |
math/py-pyodesys: switch to USES=pytest, fix tests
Reported by: reprise
Approved by: portmgr blanket |
0.14.1 21 Sep 2021 16:41:49 |
Yuri Victorovich (yuri) |
math/py-pyodesys: Update 0.14.0 -> 0.14.1
Reported by: portscout |
0.14.0 25 May 2021 17:26:23 |
Yuri Victorovich (yuri) |
math/py-pyodesys: Update 0.13.1 -> 0.14.0 |
0.13.1 10 May 2021 20:13:20 |
Thierry Thomas (thierry) |
math/py-matplotlib: chase minimum Python version in dependent ports
Since the previous update changed USES=python from 3.6+ to 3.7+, all
dependent ports must have USES=python:3.7+ as well, otherwise it breaks
the @py36 flavor.
PR: 255347
Reported by: sunpoet |
0.13.1 07 Apr 2021 08:09:01 |
Mathieu Arnold (mat) |
One more small cleanup, forgotten yesterday.
Reported by: lwhsu |
0.13.1 06 Apr 2021 14:31:07 |
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
0.13.1 26 Jul 2020 07:16:28 |
antoine |
sympy-1.6 is no longer compatible with python 2.7
Reported by: pkg-fallout |
0.13.1 30 May 2020 07:14:18 |
yuri |
math/py-pyodesys: Update 0.13.0 -> 0.13.1
Reported by: portscout |
0.13.0 07 Mar 2020 20:39:40 |
yuri |
math/py-pyodesys: Update 0.12.4 -> 0.13.0
Reported by: portscout |
0.12.4_2 26 Jul 2019 20:46:57 |
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
0.12.4_1 12 Dec 2018 01:35:36 |
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
0.12.4 18 Oct 2018 21:34:13 |
yuri |
math/py-pyodesys: Update 0.12.3 -> 0.12.4
Reported by: portscout |
0.12.3_1 21 Sep 2018 16:43:55 |
yuri |
math/py-pyodesys: Add tests; Add EXTRAS option for extra-dependencies |
0.12.3 17 Sep 2018 20:27:24 |
yuri |
math/py-pyodesys: Update 0.11.16 -> 0.12.3 |
0.11.16 09 Aug 2018 00:31:44 |
yuri |
math/py-pyodesys: Update 0.11.15 -> 0.11.16
Reported by: portscout |
0.11.15 27 Jul 2018 22:06:05 |
yuri |
math/py-pyodesys: Update 0.11.14 -> 0.11.15
Approved by: portscout |
0.11.14 20 Jun 2018 17:05:44 |
mat |
Use PY_FLAVOR for dependencies.
FLAVOR is the current port's flavor, it should not be used outside of
this scope.
Sponsored by: Absolight |
0.11.14 06 May 2018 06:33:53 |
yuri |
math/py-pyodesys: Update 0.11.11 -> 0.11.14
Reported by: portscout |
0.11.11 03 May 2018 16:48:36 |
yuri |
math/py-pyodesys: Update 0.11.10 -> 0.11.11
Reported by: portscout |
0.11.10 08 Apr 2018 05:35:11 |
yuri |
math/py-pyodesys: Unbreak, py-scipy-0.19.1 isn't committed yet |
0.11.10 05 Apr 2018 05:53:35 |
yuri |
math/py-pyodesys: Update 0.11.9 -> 0.11.10
Reported by: portscout |
0.11.9 01 Apr 2018 06:24:52 |
yuri |
New port: math/py-pyodesys: Straightforward numerical integration of ODE systems
from Python |