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Port details
py-pystan Python interface for Stan
2.19.0.0_2 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.19.0.0_2Version of this port present on the latest quarterly branch.
Broken BROKEN: several build errors
Ignore IGNORE: is marked as broken: several build errors
Maintainer: gmm@tutanota.com search for ports maintained by this maintainer
Port Added: 2019-09-03 16:02:49
Last Update: 2023-06-27 19:34:34
Commit Hash: 3d9a815
Also Listed In: python
License: GPLv3
WWW:
https://github.com/stan-dev/pystan
Description:
PyStan provides a Python interface to Stan, a package for Bayesian inference using the No-U-Turn sampler, a variant of Hamiltonian Monte Carlo. For more information on Stan and its modeling language, see the Stan User's Guide and Reference Manual at http://mc-stan.org/.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}pystan>0:math/py-pystan@${PY_FLAVOR}
To install the port:
cd /usr/ports/math/py-pystan/ && make install clean
We doubt a package is available for this port because we see it marked as as:
  • Broken
  • Ignore
Packages are normally not provided for ports that are marked as above.
To add the package, run one of these commands:
  • pkg install math/py-pystan
  • pkg install py39-pystan
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-pystan listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py39-pystan
Package flavors (<flavor>: <package>)
  • py39: py39-pystan
distinfo:
TIMESTAMP = 1563392208 SHA256 (pystan-2.19.0.0.tar.gz) = b85301b960d5991918b40bd64a4e9321813657a9fc028e0f39edce7220a309eb SIZE (pystan-2.19.0.0.tar.gz) = 16540340

No package information for this port in our database
Sometimes this happens. Not all ports have packages.
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  2. python3.9 : lang/python39
  3. py39-cython>0 : lang/cython@py39
  4. py39-numpy>0 : math/py-numpy@py39
Test dependencies:
  1. python3.9 : lang/python39
Runtime dependencies:
  1. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  2. python3.9 : lang/python39
  3. py39-cython>0 : lang/cython@py39
  4. py39-numpy>0 : math/py-numpy@py39
This port is required by:
for Build
  1. devel/py-fbprophet
for Run
  1. devel/py-fbprophet

Configuration Options:
No options to configure
Options name:
math_py-pystan
USES:
compiler:c++14-lang python shebangfix
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/pystan/
  2. https://pypi.org/packages/source/p/pystan/
Collapse this list.

Number of commits found: 15

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.19.0.0_2
27 Jun 2023 19:34:34
commit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacb files touched by this commit
Rene Ladan (rene) search for other commits by this committer
all: remove explicit versions in USES=python for "3.x+"

The logic in USES=python will automatically convert this to 3.8+ by
itself.

Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.

finance/quickfix: mark BROKEN with PYTHON

libtool: compile:  c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp  -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
          ^~~~~~~~~~
1 warning and 1 error generated.

Reviewed by:	portmgr, vishwin, yuri
Differential Revision:	<https://reviews.freebsd.org/D40568>
2.19.0.0_2
23 Apr 2023 09:09:58
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b files touched by this commit
Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
2.19.0.0_1
11 Jan 2023 15:58:34
commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656 files touched by this commit
Dmitry Marakasov (amdmi3) search for other commits by this committer
*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
2.19.0.0_1
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.19.0.0_1
01 Jun 2022 19:58:13
commit hash: 6003b7e9ad16ec2cec34b25bbc77a00993c76556commit hash: 6003b7e9ad16ec2cec34b25bbc77a00993c76556commit hash: 6003b7e9ad16ec2cec34b25bbc77a00993c76556commit hash: 6003b7e9ad16ec2cec34b25bbc77a00993c76556 files touched by this commit
Thierry Thomas (thierry) search for other commits by this committer
math/py-pystan: mark BROKEN with Python-3.9

1) This port blocks the change of the default version of Python from 3.8
   to 3.9 (See PR 261703);

2) To fix it with Python-3.9, we have to upgrade it (patch attached in
   PR 262797);

3) But this upgrade requires to install a new port, devel/stanc3 (see PR
   262795 and PR 262796);

4) And finally to add devel/stanc3 we need an infrastructure of OCaml
   ports relatively recent (see PR 262781);

5) Unfortunately it does not seem realistic to expect this modernization
   of OCaml ports before a rather long time.

Meanwhile, mark it BROKEN with Python-3.9.

PR:		262797
Approved by:	Gilbert Morgan (maintainer)
2.19.0.0_1
07 Apr 2021 08:09:01
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
2.19.0.0_1
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
2.19.0.0_1
28 Dec 2020 23:02:15
Revision:559531Original commit files touched by this commit
antoine search for other commits by this committer
Drop python 2.7 support from a few ports

With hat:	portmgr
2.19.0.0_1
27 May 2020 14:55:03
Revision:536694Original commit files touched by this commit
danfe search for other commits by this committer
Sanitize COMMENT per Section 5.6 of the FreeBSD Porter's Handbook (part 3).
2.19.0.0_1
16 Sep 2019 08:40:06
Revision:512147Original commit files touched by this commit
pkubaj search for other commits by this committer
math/py-pystan: fix build with GCC architectures

Requires C++14:
cc1plus: error: unrecognized command line option "-std=c++1y"

Approved by:    mentors (implicit approval)
2.19.0.0_1
05 Sep 2019 13:49:58
Revision:511189Original commit files touched by this commit
dvl search for other commits by this committer
Add ${WRKSRC} to LICENSE_FILE

Noticed by:	koobs
2.19.0.0_1
04 Sep 2019 11:20:06
Revision:511083Original commit files touched by this commit
dvl search for other commits by this committer
Add missing =

Noticed by:	FreshPorts
04 Sep 2019 11:17:40
Revision:511082Original commit files touched by this commit Sanity Test Failure Refresh
dvl search for other commits by this committer
* add python as a secondary virtual category
* set LICENSE_FILE
2.19.0.0
03 Sep 2019 16:02:44
Revision:510959Original commit files touched by this commit
dvl search for other commits by this committer
Add PyStan: The Python Interface to Stan

https://pystan.readthedocs.io/en/latest/

Submitted by:	Gilbert Morgan <gmm@tutanota.com> (via private email)

Number of commits found: 15