Mk/Uses/python.mk: Introduce USE_PYTHON=cython3{,_run,_test}

- Update USE_PYTHON=cython{,_run,_test}
- Convert all cython3 occurrence to USE_PYTHON=cython3*
- While I'm here, fix incorrect usage of combining cython3 in BUILD_DEPENDS and
USE_PYTHON=cython

It is added to simplify the future transition from Cython 0.29 to 3.

The minimal version is set to 3.0.12 because it is required by
devel/py-propcache.
The upper bound of version is set to 3.1 because it is limited by multiple
ports.

python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal

Any missed ports, feel free to bump.

Any ports that need setuptools at runtime can have the devel/py-setuptools
manually added back to RUN_DEPENDS, but understand that this practice
is deprecated; see CHANGES for details.

net/py-mpi4py: update to 4.0.3

Changelog: https://github.com/mpi4py/mpi4py/releases/tag/4.0.3

PR:		284811

net/py-mpi4py: Update 4.0.1 → 4.0.2

Changelog:
https://github.com/mpi4py/mpi4py/releases/tag/4.0.2

PR:	284524

net/py-mpi4py: Update 4.0.0 → 4.0.1

Changelog:
https://mpi4py.readthedocs.io/en/stable/changes.html#release-4-0-1-2024-10-11

PR:	282023

net/py-mpi4py: Update 3.1.6 → 4.0.0

Backward-incompatible changes:
  * Python 2 is no longer supported, Python 3.6+ is required, but
    typing stubs are supported for Python 3.8+.
  * The Intracomm.Create_group() method is no longer defined in the
    base Comm class.
  * Group.Compare() and Comm.Compare() are no longer class methods
    but instance methods. Existing codes using the former class
    methods are expected to continue working.
  * Group.Translate_ranks() is no longer a class method but an
    instance method. Existing codes using the former class method are
    expected to continue working.
  * The LB and UB datatypes are no longer available, use
    Datatype.Create_resized() instead.

net/py-mpi4py: Drop maintainership

net/py-mpi4py: Update to 3.1.6

net/py-mpi4py: Move man page to share/man

Approved by:	portmgr (blanket)

*/*: bump PORTREVISION after OpenMPI upgrade

net/py-mpi4py: Update to 3.1.5

net/py-mpi4py: add a slave port depending on MPICH

Sometimes we need mpi4py packaged against mpich, with Fortran enabled.

Do not create a flavor, because there already exist flavors for Python
versions, therefore a slave port seems more appropriate.

Once committed, I shall add a line in Mk/Uses/mpi.mk to grab the right
dependency according to the choice of MPI.

Bump PORTVERSION for people using net/py-mpi4py built from ports with
the non-default MPICH option.

Also change WWW: the project on bitbucket has been archived.

PR:		272949
Approved by:	wen@ (maintainer)

all: remove explicit versions in USES=python for "3.x+"

The logic in USES=python will automatically convert this to 3.8+ by
itself.

Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.

finance/quickfix: mark BROKEN with PYTHON

libtool: compile:  c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp  -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
          ^~~~~~~~~~
1 warning and 1 error generated.

Reviewed by:	portmgr, vishwin, yuri
Differential Revision:	<https://reviews.freebsd.org/D40568>

*: Bump PORTREVISIONs for math/mpc update to 1.3.1

*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt

net/py-mpi4py: Update to 3.1.4

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

net/py-mpi4py: Update to 3.1.3

net/py-mpi4py: Update to 3.1.2

net/py-mpi4py: Update to 3.1.1

Take mainatainership

One more small cleanup, forgotten yesterday.
Reported by:	lwhsu

Remove # $FreeBSD$ from Makefiles.

Set USES=mpi, and replace MPICH2 by MPICH.

Drop python 2.7 support from a few ports

With hat:	portmgr

Relax hardcoded paths to fix build with Python 3.8.7

Since r558913 Python 3.8 incorporates BPO-42604 [1] which changed the
shared libs naming scheme.  This means "EXT_SUFFIX" is now derived from
SOABI and yields with Python 3.8 to ".cpython-38.so" instead of ".so".

The affected ports strip the libaries in the "post-install" target via
hardcoded path(s) and the build fails at the end because the new extension
is not expected at this place.

Remedy the issue by adding wildcards to these paths.  This should also
prepare the ports for future Python releases, which will use the new shared
libs naming scheme.

[1] https://bugs.python.org/issue42604

PR:		252057
Reported by:	John Kennedy
Reviewed by:	fluffy, koobs
Approved by:	koobs (python)

net/py-mpi4py: Move OpenMPI dependecy from net/openmpi3 to net/openmpi (OpenMPI
4)

Reported by:	linimon

- Update to 3.0.3
- Move OpenMPI support to net/openmpi3. OpenMPI 1 and 2 are deprecated

audio/festvox-cmu_us_slt_arctic, games/flightgear-terragear,
graphics/zathura-cb, graphics/zathura-pdf-poppler, graphics/zathura-ps,
math/nfft, net/py-mpi4py, science/aircraft-datcom, x11-themes/gnome-icons-luv:
reset MAINTAINER

Submitted by:	Michael Danilov <mike.d.ft402@gmail.com> (maintainer)

Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330

Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl

Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590

New port: net/py-mpi4py: Python bindings for MPI

PR:		211768
Submitted by:	Michael Danilov <mike.d.ft402@gmail.com>