| Port details |
- cardioid Cardiac simulation toolkit
- g20211026_3 science
 =2      g20211026_3Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2022-08-24 20:33:07
- Last Update: 2024-11-03 20:09:30
- Commit Hash: be212a0
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- License: MIT
- WWW:
- https://github.com/LLNL/cardioid
- Description:
- Cardioid is a cardiac multiscale simulation suite spanning from subcellular
mechanisms up to simulations of organ-level clinical phenomena. The suite
contains tools for simulating cardiac electrophysiology, cardiac mechanics,
torso-ECGs, cardiac meshing and fiber generation tools.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- cardioid>0:science/cardioid
- To install the port:
- cd /usr/ports/science/cardioid/ && make install clean
- To add the package, run one of these commands:
- pkg install science/cardioid
- pkg install cardioid
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: cardioid
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1661371882
SHA256 (LLNL-cardioid-g20211026-2f66d9f_GH0.tar.gz) = 16bfedb27110170adcf8f3090379a56c8e1637256e2761e85d98c9c043dcf970
SIZE (LLNL-cardioid-g20211026-2f66d9f_GH0.tar.gz) = 6781832
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- cmake : devel/cmake-core
- ninja : devel/ninja
- Runtime dependencies:
-
- bash : shells/bash
- Library dependencies:
-
- libblas.so : math/blas
- liblapack.so : math/lapack
- libmpich.so : net/mpich
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for cardioid-g20211026_3:
MFEM=off: Build with MFEM mesh library
OPENMP=on: Parallel processing support via OpenMP
====> MPI (Message Passing Interface) support: you have to select exactly one of them
NOMPI=off: Build without parallel processing support
MPICH=on: Parallel processing support via MPICH
OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
- Options name:
- science_cardioid
- USES:
- cmake:testing shebangfix mpi:mpich compiler:c++11-lang pkgconfig
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 8
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
g20211026_3
03 Nov 2024 20:09:30
 |
Yuri Victorovich (yuri) |
science/cardioid: Fix build on 15 with clang-19
Reported by: fallout |
g20211026_3
29 Jul 2024 15:10:13
|
Piotr Kubaj (pkubaj) |
science/cardioid: fix build without libomp
CMake Error at
/usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:230
(message):
Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) |
g20211026_3
01 Jan 2024 11:49:51
|
Thierry Thomas (thierry) |
*/*: chase the upgrade of BLAS / LAPACK to 3.12.0
PR: 275860 |
g20211026_2
10 Dec 2023 10:23:11
|
Thierry Thomas (thierry) |
*/*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 |
g20211026_1
23 Apr 2023 09:09:58
|
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
07 Sep 2022 21:58:51
|
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
g20211026
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
g20211026
24 Aug 2022 20:32:26
|
Yuri Victorovich (yuri) |
science/cardioid: New port: Cardiac simulation toolkit |
Number of commits found: 8
|
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