| Port details |
- libccp4 Protein X-ray crystallography toolkit
- 6.5.1_5 science
 =2      6.5.1_5Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2018-07-08 00:25:10
- Last Update: 2023-04-23 09:09:58
- Commit Hash: 8d3e020
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- Also Listed In: education
- License: GPLv3 LGPL3
- WWW:
- https://www.ccp4.ac.uk/
- Description:
- CCP4 exists to produce and support a world-leading, integrated suite of programs
that allows researchers to determine macromolecular structures by X-ray
crystallography, and other biophysical techniques. CCP4 aims to develop and
support the development of cutting edge approaches to experimental determination
and analysis of protein structure, and integrate these approaches into the
suite. CCP4 is a community based resource that supports the widest possible
researcher community, embracing academic, not for profit, and for profit
research. CCP4 aims to play a key role in the education and training of
scientists in experimental structural biology. It encourages the wide
dissemination of new ideas, techniques and practice.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- libccp4>0:science/libccp4
- To install the port:
- cd /usr/ports/science/libccp4/ && make install clean
- To add the package, run one of these commands:
- pkg install science/libccp4
- pkg install libccp4
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: libccp4
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1531007069
SHA256 (libccp4-6.5.1.tar.gz) = 280b473d950cdf8837ef66147ec581104298b892399bd856f13b096f2395dbe5
SIZE (libccp4-6.5.1.tar.gz) = 947521
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gfortran12 : lang/gcc12
- gmake>=4.3 : devel/gmake
- as : devel/binutils
- Runtime dependencies:
-
- gfortran12 : lang/gcc12
- Library dependencies:
-
- libmmdb2.so : science/mmdb2
- This port is required by:
- for Libraries
-
- science/clipper
- science/libssm
-
Deleted ports which required this port:
- * - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...
Configuration Options:- No options to configure
- Options name:
- science_libccp4
- USES:
- fortran gmake libtool localbase:ldflags
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 13
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
6.5.1_5
23 Apr 2023 09:09:58
 |
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
07 Sep 2022 21:58:51
|
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
6.5.1_4
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
6.5.1_4
07 Apr 2021 08:09:01
|
Mathieu Arnold (mat) |
One more small cleanup, forgotten yesterday.
Reported by: lwhsu |
6.5.1_4
06 Apr 2021 14:31:07
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
6.5.1_4
20 Nov 2020 07:16:06
 |
adamw |
Add education virtual category
PR: 248402
Submitted by: PauAmma |
6.5.1_4
04 Jul 2020 11:10:29
|
tobik |
science/libccp4: Unbreak build with GCC 10
fortran/pack_f.f:109:28:
45 | call pack_wordimage_f(data, x, y, filnarray)
| 2
......
109 | call pack_wordimage_f(data, x, y, filnarray)
| 1
Error: Type mismatch between actual argument at (1) and actual argument at (2)
(INTEGER(4)/INTEGER(2)).
fortran/pack_f.f:141:30:
77 | call v2pack_wordimage_f(data, x, y, filnarray)
| 2
......
141 | call v2pack_wordimage_f(data, x, y, filnarray)
| 1
Error: Type mismatch between actual argument at (1) and actual argument at (2)
(INTEGER(4)/INTEGER(2)).
http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/libccp4-6.5.1_4.log
PR: 246700 |
6.5.1_4
26 Jul 2019 20:46:57
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
6.5.1_3
22 Apr 2019 13:16:34
|
gerald |
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.
Suggested by: tijl |
6.5.1_2
29 Mar 2019 21:06:52
|
linimon |
Mark as broken on aarch64:
ccp4/ccp4_sysdep.h:244:4: error: "Can't determine machine number format"
Approved by: portmgr (tier-2 blanket) |
6.5.1_2
12 Dec 2018 01:35:36
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
6.5.1_1
29 Jul 2018 22:18:46
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.
This includes ports
- featuring USE_GCC=yes or USE_GCC=any,
- featuring USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and those
- with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.
PR: 222542 |
6.5.1
08 Jul 2018 00:24:55
|
yuri |
New port: science/libccp4: Protein X-ray crystallography toolkit |
Number of commits found: 13
|
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