As an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photos
All times are UTCnotbug
Remember
I remember
Menu ☰ Menu
Searches without login should now work. You must get asked to click a button.
Some translations wanted please.
New RSS 2.0 and Atom feeds are here. The old /backend/ feeds still work, but will be redirected later, so please update your subscriptions. Details.
Port details
minc-tools Basic minc-tools from former minc repository
2.3.00_1 science Σ=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.3.00_1Version of this port present on the latest quarterly branch.
Deprecated DEPRECATED: Abandoned upstream, does not build with CMake 4
Expiration Date EXPIRATION DATE: 2026-11-30
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2026-06-24 15:33:05
Last Update: 2026-09-21 17:58:26
Commit Hash: 94f7568
Also Listed In: biology
License: MIT
WWW:
https://www.bic.mni.mcgill.ca/ServicesSoftware/MINC
Description: #
MINC - Medical Image NetCDF or MINC isn't netCDF. This metaproject bundles multiple MINC-based packages that historically have been developed somewhat independently. Note: previously, this port was science/mint2, but it is now split into two parts: libminc and minc-tools.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port
Manual pages: #
Expand this list (42 items)
pkg-plist: as obtained via: make generate-plist #
Expand this list (92 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/minc-tools-2.3.00_1/catalog.mk
  3. /usr/local/share/licenses/minc-tools-2.3.00_1/LICENSE
  4. /usr/local/share/licenses/minc-tools-2.3.00_1/MIT
  5. bin/dcm2mnc
  6. bin/ecattominc
  7. bin/invert_raw_image
  8. bin/minc_modify_header
  9. bin/mincaverage
  10. bin/mincblob
  11. bin/minccalc
  12. bin/minccmp
  13. bin/mincconcat
  14. bin/mincconvert
  15. bin/minccopy
  16. bin/mincdiff
  17. bin/mincdump
  18. bin/mincedit
  19. bin/mincexpand
  20. bin/mincextract
  21. bin/mincgen
  22. bin/mincheader
  23. bin/minchistory
  24. bin/mincinfo
  25. bin/minclookup
  26. bin/mincmakescalar
  27. bin/mincmakevector
  28. bin/mincmath
  29. bin/mincmorph
  30. bin/mincpik
  31. bin/mincresample
  32. bin/mincreshape
  33. bin/mincsample
  34. bin/mincstats
  35. bin/minctoecat
  36. bin/minctoraw
  37. bin/mincview
  38. bin/mincwindow
  39. bin/mnc2nii
  40. bin/nii2mnc
  41. bin/rawtominc
  42. bin/transformtags
  43. bin/upet2mnc
  44. bin/voxeltoworld
  45. bin/worldtovoxel
  46. bin/xfmconcat
  47. bin/xfminvert
  48. share/man/man1/dcm2mnc.1.gz
  49. share/man/man1/ecattominc.1.gz
  50. share/man/man1/invert_raw_image.1.gz
  51. share/man/man1/minc_modify_header.1.gz
  52. share/man/man1/mincaverage.1.gz
  53. share/man/man1/mincblob.1.gz
  54. share/man/man1/minccalc.1.gz
  55. share/man/man1/minccmp.1.gz
  56. share/man/man1/mincconcat.1.gz
  57. share/man/man1/mincconvert.1.gz
  58. share/man/man1/minccopy.1.gz
  59. share/man/man1/mincdiff.1.gz
  60. share/man/man1/mincdump.1.gz
  61. share/man/man1/mincedit.1.gz
  62. share/man/man1/mincexpand.1.gz
  63. share/man/man1/mincextract.1.gz
  64. share/man/man1/mincgen.1.gz
  65. share/man/man1/mincheader.1.gz
  66. share/man/man1/mincinfo.1.gz
  67. share/man/man1/minclookup.1.gz
  68. share/man/man1/mincmakescalar.1.gz
  69. share/man/man1/mincmakevector.1.gz
  70. share/man/man1/mincmath.1.gz
  71. share/man/man1/mincresample.1.gz
  72. share/man/man1/mincreshape.1.gz
  73. share/man/man1/mincsample.1.gz
  74. share/man/man1/mincstats.1.gz
  75. share/man/man1/minctoecat.1.gz
  76. share/man/man1/minctoraw.1.gz
  77. share/man/man1/mincview.1.gz
  78. share/man/man1/mincwindow.1.gz
  79. share/man/man1/mnc2nii.1.gz
  80. share/man/man1/nii2mnc.1.gz
  81. share/man/man1/rawtominc.1.gz
  82. share/man/man1/transformtags.1.gz
  83. share/man/man1/upet2mnc.1.gz
  84. share/man/man1/vff2mnc.1.gz
  85. share/man/man1/voxeltoworld.1.gz
  86. share/man/man1/xfm2def.1.gz
  87. share/man/man1/xfmconcat.1.gz
  88. share/man/man1/xfmflip.1.gz
  89. share/man/man1/xfminvert.1.gz
  90. @owner
  91. @group
  92. @mode
Collapse this list.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • minc-tools>0:science/minc-tools
To install the port: #
cd /usr/ports/science/minc-tools/ && make install clean
To add the package, run one of these commands:
  • pkg install science/minc-tools
  • pkg install minc-tools
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: minc-tools
Flavors: #
there is no flavor information for this port.
distinfo: #
TIMESTAMP = 1782294411 SHA256 (minc-tools-2-3-00.tar.gz) = b505e9666706ac2e7f58febb1e5fcda24fc858b0dc7625d433d409cff33e85b4 SIZE (minc-tools-2-3-00.tar.gz) = 3002667
Packages (timestamps in pop-ups are UTC): #
minc-tools
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest2.3.00_12.3.00_1--2.3.00_1
FreeBSD:14:quarterly2.3.00_12.3.00_1--2.3.00_1
FreeBSD:15:latest2.3.00_12.3.00_1n/a-n/a
FreeBSD:15:quarterly2.3.00_12.3.00_1n/a-n/a
FreeBSD:16:latest2.3.00_12.3.00_1n/a-n/a
Dependencies #
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies: #
  1. nifticlib>0 : science/nifticlib
  2. bison : devel/bison
  3. cmake : devel/cmake-core
  4. ninja : devel/ninja
  5. perl5>=5.42.r<5.43 : lang/perl5.42
Runtime dependencies: #
  1. bash : shells/bash
  2. perl5>=5.42.r<5.43 : lang/perl5.42
Library dependencies: #
  1. libhdf5.so : science/hdf5
  2. libnetcdf.so : science/netcdf
  3. libminc2.so : science/libminc
There are no ports dependent upon this port #
Configuration Options: #
No options to configure
Options name: #
science_minc-tools
USES: #
bison cmake localbase perl5 shebangfix
pkg-message: #
FreshPorts was unable to extract/find any pkg message
Master Sites: #
Expand this list (1 items)
Collapse this list.
  1. https://github.com/BIC-MNI/minc-tools/archive/refs/tags/
Collapse this list.
Port Moves
  • port moved here from science/minc2 on 2026-06-24
    REASON: Split into science/minc-tools and science/libminc

Number of commits found: 2 #

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.3.00_1
21 Sep 2026 17:58:26
commit hash: 94f756854a95596a214b950720cbf35803e1ce19commit hash: 94f756854a95596a214b950720cbf35803e1ce19commit hash: 94f756854a95596a214b950720cbf35803e1ce19commit hash: 94f756854a95596a214b950720cbf35803e1ce19 files touched by this commit		 Gleb Popov (arrowd) search for other commits by this committer 
science/minc-tools: Mark deprecated
2.3.00
24 Jun 2026 15:31:48
commit hash: 3f229fd0f455dd56ed9bb7f2899329d835f4b2cbcommit hash: 3f229fd0f455dd56ed9bb7f2899329d835f4b2cbcommit hash: 3f229fd0f455dd56ed9bb7f2899329d835f4b2cbcommit hash: 3f229fd0f455dd56ed9bb7f2899329d835f4b2cb files touched by this commit		 Thierry Thomas (thierry) search for other commits by this committer 
science/minc-tools: split from science/minc2 and upgrade to 2-3-00

minc2 is obsolete: this package is now split into two parts: libminc and
minc-tools.

Number of commits found: 2

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
Security Policy
Privacy
Blog
Contact

Latest Vulnerabilities
chromium*Nov 04
chromiumNov 04
chromium*Nov 04
linux-chrome*Nov 04
linux-chromeNov 04
linux-chrome*Nov 04
ungoogled-chromium*Nov 04
ungoogled-chromiumNov 04
ungoogled-chromium*Nov 04
wolfsshNov 04
krillNov 03
rsyncNov 03
freenginxNov 02
hurlNov 02
phpbb3Nov 02

73 vulnerabilities affecting 687 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last processed:
2026-11-04 13:26:04 UTC


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)

Calculated hourly:
Port count 35379
Broken 60
Deprecated 351
Ignore 183
Forbidden 0
Restricted 1
No CDROM 1
Vulnerable 56
Expired 11
Set to expire 270
Interactive 0
new 24 hours 9
new 48 hours19
new 7 days73
new fortnight114
new month258
Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD 		Valid HTML, CSS, and RSS. Copyright © 2000-2026 Dan Langille. All rights reserved.