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Port details
plumed PLUgin for MolEcular Dynamics
2.9.3_1 science on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.8.0_2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2020-05-04 19:56:15
Last Update: 2025-01-24 12:18:28
Commit Hash: 6cce1f5
People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
Also Listed In: graphics
License: LGPL3
WWW:
https://www.plumed.org/
Description:
PLUMED is an open-source, community-developed library that provides a wide range of different methods, which include: * enhanced-sampling algorithms * free-energy methods * tools to analyze the vast amounts of data produced by molecular dynamics (MD) simulations.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (630 items)
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  1. @ldconfig
  2. /usr/local/share/licenses/plumed-2.9.3_1/catalog.mk
  3. /usr/local/share/licenses/plumed-2.9.3_1/LICENSE
  4. /usr/local/share/licenses/plumed-2.9.3_1/LGPL3
  5. bin/plumed
  6. bin/plumed-config
  7. bin/plumed-patch
  8. include/plumed/analysis/AnalysisBase.h
  9. include/plumed/analysis/AverageVessel.h
  10. include/plumed/analysis/DataCollectionObject.h
  11. include/plumed/analysis/LandmarkSelectionBase.h
  12. include/plumed/analysis/ReadAnalysisFrames.h
  13. include/plumed/asmjit/arch.h
  14. include/plumed/asmjit/arm.h
  15. include/plumed/asmjit/asmjit.h
  16. include/plumed/asmjit/asmjit_apibegin.h
  17. include/plumed/asmjit/asmjit_apiend.h
  18. include/plumed/asmjit/asmjit_build.h
  19. include/plumed/asmjit/assembler.h
  20. include/plumed/asmjit/base.h
  21. include/plumed/asmjit/codebuilder.h
  22. include/plumed/asmjit/codecompiler.h
  23. include/plumed/asmjit/codeemitter.h
  24. include/plumed/asmjit/codeholder.h
  25. include/plumed/asmjit/constpool.h
  26. include/plumed/asmjit/cpuinfo.h
  27. include/plumed/asmjit/func.h
  28. include/plumed/asmjit/globals.h
  29. include/plumed/asmjit/inst.h
  30. include/plumed/asmjit/logging.h
  31. include/plumed/asmjit/misc_p.h
  32. include/plumed/asmjit/moved_string.h
  33. include/plumed/asmjit/operand.h
  34. include/plumed/asmjit/osutils.h
  35. include/plumed/asmjit/regalloc_p.h
  36. include/plumed/asmjit/runtime.h
  37. include/plumed/asmjit/simdtypes.h
  38. include/plumed/asmjit/utils.h
  39. include/plumed/asmjit/vmem.h
  40. include/plumed/asmjit/x86.h
  41. include/plumed/asmjit/x86assembler.h
  42. include/plumed/asmjit/x86builder.h
  43. include/plumed/asmjit/x86compiler.h
  44. include/plumed/asmjit/x86emitter.h
  45. include/plumed/asmjit/x86globals.h
  46. include/plumed/asmjit/x86inst.h
  47. include/plumed/asmjit/x86instimpl_p.h
  48. include/plumed/asmjit/x86internal_p.h
  49. include/plumed/asmjit/x86logging_p.h
  50. include/plumed/asmjit/x86misc.h
  51. include/plumed/asmjit/x86operand.h
  52. include/plumed/asmjit/x86regalloc_p.h
  53. include/plumed/asmjit/zone.h
  54. include/plumed/bias/ActionRegister.h
  55. include/plumed/bias/Bias.h
  56. include/plumed/bias/ReweightBase.h
  57. include/plumed/blas/blas.h
  58. include/plumed/blas/def_external.h
  59. include/plumed/blas/def_internal.h
  60. include/plumed/blas/real.h
  61. include/plumed/cltools/CLTool.h
  62. include/plumed/cltools/CLToolRegister.h
  63. include/plumed/colvar/ActionRegister.h
  64. include/plumed/colvar/Colvar.h
  65. include/plumed/colvar/CoordinationBase.h
  66. include/plumed/colvar/PathMSDBase.h
  67. include/plumed/config/Config.h
  68. include/plumed/config/version.h
  69. include/plumed/core/Action.h
  70. include/plumed/core/ActionAnyorder.h
  71. include/plumed/core/ActionAtomistic.h
  72. include/plumed/core/ActionPilot.h
  73. include/plumed/core/ActionRegister.h
  74. include/plumed/core/ActionSet.h
  75. include/plumed/core/ActionSetup.h
  76. include/plumed/core/ActionShortcut.h
  77. include/plumed/core/ActionWithArguments.h
  78. include/plumed/core/ActionWithValue.h
  79. include/plumed/core/ActionWithVirtualAtom.h
  80. include/plumed/core/Atoms.h
  81. include/plumed/core/CLTool.h
  82. include/plumed/core/CLToolMain.h
  83. include/plumed/core/CLToolRegister.h
  84. include/plumed/core/Colvar.h
  85. include/plumed/core/DataFetchingObject.h
  86. include/plumed/core/ExchangePatterns.h
  87. include/plumed/core/FlexibleBin.h
  88. include/plumed/core/GREX.h
  89. include/plumed/core/GenericMolInfo.h
  90. include/plumed/core/MDAtoms.h
  91. include/plumed/core/ModuleMap.h
  92. include/plumed/core/PlumedMain.h
  93. include/plumed/core/PlumedMainInitializer.h
  94. include/plumed/core/TargetDist.h
  95. include/plumed/core/Value.h
  96. include/plumed/core/WithCmd.h
  97. include/plumed/function/ActionRegister.h
  98. include/plumed/function/Function.h
  99. include/plumed/gridtools/ActionWithGrid.h
  100. include/plumed/gridtools/ActionWithInputGrid.h
  101. include/plumed/gridtools/ActionWithIntegral.h
  102. include/plumed/gridtools/AverageOnGrid.h
  103. include/plumed/gridtools/ContourFindingBase.h
  104. include/plumed/gridtools/GridPrintingBase.h
  105. include/plumed/gridtools/GridSearch.h
  106. include/plumed/gridtools/GridVessel.h
  107. include/plumed/gridtools/HistogramOnGrid.h
  108. include/plumed/isdb/MetainferenceBase.h
  109. include/plumed/lapack/def_external.h
  110. include/plumed/lapack/def_internal.h
  111. include/plumed/lapack/lapack.h
  112. include/plumed/lapack/lapack_limits.h
  113. include/plumed/lapack/real.h
  114. include/plumed/lepton/CompiledExpression.h
  115. include/plumed/lepton/CustomFunction.h
  116. include/plumed/lepton/Exception.h
  117. include/plumed/lepton/ExpressionProgram.h
  118. include/plumed/lepton/ExpressionTreeNode.h
  119. include/plumed/lepton/Lepton.h
  120. include/plumed/lepton/MSVC_erfc.h
  121. include/plumed/lepton/Operation.h
  122. include/plumed/lepton/ParsedExpression.h
  123. include/plumed/lepton/Parser.h
  124. include/plumed/lepton/windowsIncludes.h
  125. include/plumed/mapping/Mapping.h
  126. include/plumed/mapping/PathBase.h
  127. include/plumed/mapping/PathReparameterization.h
  128. include/plumed/mapping/TrigonometricPathVessel.h
  129. include/plumed/molfile/Gromacs.h
  130. include/plumed/molfile/endianswap.h
  131. include/plumed/molfile/fastio.h
  132. include/plumed/molfile/largefiles.h
  133. include/plumed/molfile/libmolfile_plugin.h
  134. include/plumed/molfile/molfile_plugin.h
  135. include/plumed/molfile/periodic_table.h
  136. include/plumed/molfile/readpdb.h
  137. include/plumed/molfile/vmdplugin.h
  138. include/plumed/multicolvar/ActionVolume.h
  139. include/plumed/multicolvar/AtomValuePack.h
  140. include/plumed/multicolvar/BridgedMultiColvarFunction.h
  141. include/plumed/multicolvar/CatomPack.h
  142. include/plumed/multicolvar/MultiColvarBase.h
  143. include/plumed/multicolvar/MultiColvarFilter.h
  144. include/plumed/multicolvar/VolumeGradientBase.h
  145. include/plumed/reference/ArgumentOnlyDistance.h
  146. include/plumed/reference/DRMSD.h
  147. include/plumed/reference/Direction.h
  148. include/plumed/reference/FakeFrame.h
  149. include/plumed/reference/MetricRegister.h
  150. include/plumed/reference/MultiDomainRMSD.h
  151. include/plumed/reference/RMSDBase.h
  152. include/plumed/reference/ReferenceArguments.h
  153. include/plumed/reference/ReferenceAtoms.h
  154. include/plumed/reference/ReferenceConfiguration.h
  155. include/plumed/reference/ReferenceValuePack.h
  156. include/plumed/reference/SingleDomainRMSD.h
  157. include/plumed/secondarystructure/SecondaryStructureRMSD.h
  158. include/plumed/setup/ActionSetup.h
  159. include/plumed/tools/Angle.h
  160. include/plumed/tools/AtomNumber.h
  161. include/plumed/tools/BiasRepresentation.h
  162. include/plumed/tools/Brent1DRootSearch.h
  163. include/plumed/tools/Citations.h
  164. include/plumed/tools/Communicator.h
  165. include/plumed/tools/ConjugateGradient.h
  166. include/plumed/tools/DLLoader.h
  167. include/plumed/tools/DynamicList.h
  168. include/plumed/tools/ERMSD.h
  169. include/plumed/tools/Exception.h
  170. include/plumed/tools/File.h
  171. include/plumed/tools/FileBase.h
  172. include/plumed/tools/ForwardDecl.h
  173. include/plumed/tools/Grid.h
  174. include/plumed/tools/HistogramBead.h
  175. include/plumed/tools/IFile.h
  176. include/plumed/tools/KernelFunctions.h
  177. include/plumed/tools/Keywords.h
  178. include/plumed/tools/LatticeReduction.h
  179. include/plumed/tools/LinkCells.h
  180. include/plumed/tools/Log.h
  181. include/plumed/tools/LoopUnroller.h
  182. include/plumed/tools/Matrix.h
  183. include/plumed/tools/MatrixSquareBracketsAccess.h
  184. include/plumed/tools/Minimise1DBrent.h
  185. include/plumed/tools/MinimiseBase.h
  186. include/plumed/tools/MolDataClass.h
  187. include/plumed/tools/MultiValue.h
  188. include/plumed/tools/NeighborList.h
  189. include/plumed/tools/OFile.h
  190. include/plumed/tools/OpenMP.h
  191. include/plumed/tools/PDB.h
  192. include/plumed/tools/Pbc.h
  193. include/plumed/tools/PlumedHandle.h
  194. include/plumed/tools/RMSD.h
  195. include/plumed/tools/Random.h
  196. include/plumed/tools/RootFindingBase.h
  197. include/plumed/tools/Stopwatch.h
  198. include/plumed/tools/Subprocess.h
  199. include/plumed/tools/SwitchingFunction.h
  200. include/plumed/tools/Tensor.h
  201. include/plumed/tools/Tools.h
  202. include/plumed/tools/Torsion.h
  203. include/plumed/tools/Tree.h
  204. include/plumed/tools/TypesafePtr.h
  205. include/plumed/tools/Units.h
  206. include/plumed/tools/Vector.h
  207. include/plumed/tools/h36.h
  208. include/plumed/vatom/ActionRegister.h
  209. include/plumed/vatom/ActionWithVirtualAtom.h
  210. include/plumed/vesselbase/ActionWithAveraging.h
  211. include/plumed/vesselbase/ActionWithInputVessel.h
  212. include/plumed/vesselbase/ActionWithVessel.h
  213. include/plumed/vesselbase/AveragingVessel.h
  214. include/plumed/vesselbase/Between.h
  215. include/plumed/vesselbase/BridgeVessel.h
  216. include/plumed/vesselbase/FunctionVessel.h
  217. include/plumed/vesselbase/LessThan.h
  218. include/plumed/vesselbase/OrderingVessel.h
  219. include/plumed/vesselbase/ShortcutVessel.h
  220. include/plumed/vesselbase/StoreDataVessel.h
  221. include/plumed/vesselbase/ValueVessel.h
  222. include/plumed/vesselbase/Vessel.h
  223. include/plumed/vesselbase/VesselRegister.h
  224. include/plumed/wrapper/Plumed.h
  225. include/plumed/xdrfile/xdrfile.h
  226. include/plumed/xdrfile/xdrfile_trr.h
  227. include/plumed/xdrfile/xdrfile_xtc.h
  228. lib/libplumed.a
  229. lib/libplumed.so
  230. lib/libplumedKernel.so
  231. lib/libplumedWrapper.a
  232. lib/plumed/fortran/plumed.f90
  233. lib/plumed/fortran/plumed_f08.f90
  234. lib/plumed/json/syntax.json
  235. lib/plumed/modulefile
  236. lib/plumed/patches/gromacs-2020.7.config
  237. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/CMakeLists.txt
  238. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/CMakeLists.txt.preplumed
  239. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/expanded.cpp
  240. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/expanded.cpp.preplumed
  241. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/expanded.h
  242. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/expanded.h.preplumed
  243. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/force.cpp
  244. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdlib/force.cpp.preplumed
  245. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  246. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  247. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/legacymdrunoptions.h
  248. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  249. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/md.cpp
  250. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/md.cpp.preplumed
  251. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/minimize.cpp
  252. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  253. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/replicaexchange.cpp
  254. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  255. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/replicaexchange.h
  256. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  257. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/runner.cpp
  258. lib/plumed/patches/gromacs-2020.7.diff/src/gromacs/mdrun/runner.cpp.preplumed
  259. lib/plumed/patches/gromacs-2021.7.config
  260. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/CMakeLists.txt
  261. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/CMakeLists.txt.preplumed
  262. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/expanded.cpp
  263. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/expanded.cpp.preplumed
  264. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/expanded.h
  265. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/expanded.h.preplumed
  266. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/sim_util.cpp
  267. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdlib/sim_util.cpp.preplumed
  268. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  269. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  270. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/legacymdrunoptions.h
  271. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  272. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/md.cpp
  273. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/md.cpp.preplumed
  274. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/minimize.cpp
  275. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  276. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/replicaexchange.cpp
  277. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  278. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/replicaexchange.h
  279. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  280. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/rerun.cpp
  281. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/rerun.cpp.preplumed
  282. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/runner.cpp
  283. lib/plumed/patches/gromacs-2021.7.diff/src/gromacs/mdrun/runner.cpp.preplumed
  284. lib/plumed/patches/gromacs-2022.5.config
  285. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/CMakeLists.txt
  286. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/CMakeLists.txt.preplumed
  287. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/expanded.cpp
  288. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/expanded.cpp.preplumed
  289. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/expanded.h
  290. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/expanded.h.preplumed
  291. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/sim_util.cpp
  292. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdlib/sim_util.cpp.preplumed
  293. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  294. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  295. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/legacymdrunoptions.h
  296. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  297. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/md.cpp
  298. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/md.cpp.preplumed
  299. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/minimize.cpp
  300. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  301. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/replicaexchange.cpp
  302. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  303. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/replicaexchange.h
  304. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  305. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/rerun.cpp
  306. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/rerun.cpp.preplumed
  307. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/runner.cpp
  308. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/mdrun/runner.cpp.preplumed
  309. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp
  310. lib/plumed/patches/gromacs-2022.5.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp.preplumed
  311. lib/plumed/patches/gromacs-2023.5.config
  312. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/CMakeLists.txt
  313. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/CMakeLists.txt.preplumed
  314. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/expanded.cpp
  315. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/expanded.cpp.preplumed
  316. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/expanded.h
  317. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/expanded.h.preplumed
  318. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/sim_util.cpp
  319. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdlib/sim_util.cpp.preplumed
  320. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  321. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  322. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/legacymdrunoptions.h
  323. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  324. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/md.cpp
  325. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/md.cpp.preplumed
  326. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/minimize.cpp
  327. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  328. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/replicaexchange.cpp
  329. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  330. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/replicaexchange.h
  331. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  332. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/rerun.cpp
  333. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/rerun.cpp.preplumed
  334. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/runner.cpp
  335. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/mdrun/runner.cpp.preplumed
  336. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp
  337. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp.preplumed
  338. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/taskassignment/decidegpuusage.cpp
  339. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/taskassignment/decidegpuusage.cpp.preplumed
  340. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/taskassignment/include/gromacs/taskassignment/decidegpuusage.h
  341. lib/plumed/patches/gromacs-2023.5.diff/src/gromacs/taskassignment/include/gromacs/taskassignment/decidegpuusage.h.preplumed
  342. lib/plumed/patches/gromacs-2024.3.config
  343. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/CMakeLists.txt
  344. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/CMakeLists.txt.preplumed
  345. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/expanded.cpp
  346. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/expanded.cpp.preplumed
  347. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/expanded.h
  348. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/expanded.h.preplumed
  349. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/sim_util.cpp
  350. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdlib/sim_util.cpp.preplumed
  351. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  352. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  353. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/legacymdrunoptions.h
  354. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  355. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/md.cpp
  356. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/md.cpp.preplumed
  357. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/minimize.cpp
  358. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  359. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/replicaexchange.cpp
  360. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  361. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/replicaexchange.h
  362. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  363. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/rerun.cpp
  364. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/rerun.cpp.preplumed
  365. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/runner.cpp
  366. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/mdrun/runner.cpp.preplumed
  367. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp
  368. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/modularsimulator/expandedensembleelement.cpp.preplumed
  369. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/taskassignment/decidegpuusage.cpp
  370. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/taskassignment/decidegpuusage.cpp.preplumed
  371. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/taskassignment/include/gromacs/taskassignment/decidegpuusage.h
  372. lib/plumed/patches/gromacs-2024.3.diff/src/gromacs/taskassignment/include/gromacs/taskassignment/decidegpuusage.h.preplumed
  373. lib/plumed/patches/namd-2.12.config
  374. lib/plumed/patches/namd-2.12.diff
  375. lib/plumed/patches/namd-2.13.config
  376. lib/plumed/patches/namd-2.13.diff
  377. lib/plumed/patches/namd-2.14.config
  378. lib/plumed/patches/namd-2.14.diff
  379. lib/plumed/patches/patch.sh
  380. lib/plumed/patches/qespresso-5.0.2.config
  381. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/forces.f90
  382. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/forces.f90.preplumed
  383. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_forces.f90
  384. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_forces.f90.preplumed
  385. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_initialization.f90
  386. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_initialization.f90.preplumed
  387. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/pwscf.f90
  388. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/pwscf.f90.preplumed
  389. lib/plumed/patches/qespresso-6.2.config
  390. lib/plumed/patches/qespresso-6.2.diff/PW/src/forces.f90
  391. lib/plumed/patches/qespresso-6.2.diff/PW/src/forces.f90.preplumed
  392. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_ext_forces.f90
  393. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_ext_forces.f90.preplumed
  394. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_initialization.f90
  395. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_initialization.f90.preplumed
  396. lib/plumed/patches/qespresso-6.2.diff/PW/src/run_pwscf.f90
  397. lib/plumed/patches/qespresso-6.2.diff/PW/src/run_pwscf.f90.preplumed
  398. lib/plumed/patches/qespresso-7.0.config
  399. lib/plumed/patches/qespresso-7.0.diff/Modules/Makefile
  400. lib/plumed/patches/qespresso-7.0.diff/Modules/Makefile.preplumed
  401. lib/plumed/patches/qespresso-7.0.diff/PW/src/forces.f90
  402. lib/plumed/patches/qespresso-7.0.diff/PW/src/forces.f90.preplumed
  403. lib/plumed/patches/qespresso-7.0.diff/PW/src/plugin_ext_forces.f90
  404. lib/plumed/patches/qespresso-7.0.diff/PW/src/plugin_ext_forces.f90.preplumed
  405. lib/plumed/patches/qespresso-7.0.diff/PW/src/plugin_initialization.f90
  406. lib/plumed/patches/qespresso-7.0.diff/PW/src/plugin_initialization.f90.preplumed
  407. lib/plumed/patches/qespresso-7.0.diff/PW/src/run_pwscf.f90
  408. lib/plumed/patches/qespresso-7.0.diff/PW/src/run_pwscf.f90.preplumed
  409. lib/plumed/patches/qespresso-7.2.config
  410. lib/plumed/patches/qespresso-7.2.diff/Modules/Makefile
  411. lib/plumed/patches/qespresso-7.2.diff/Modules/Makefile.preplumed
  412. lib/plumed/patches/qespresso-7.2.diff/PW/src/forces.f90
  413. lib/plumed/patches/qespresso-7.2.diff/PW/src/forces.f90.preplumed
  414. lib/plumed/patches/qespresso-7.2.diff/PW/src/plugin_ext_forces.f90
  415. lib/plumed/patches/qespresso-7.2.diff/PW/src/plugin_ext_forces.f90.preplumed
  416. lib/plumed/patches/qespresso-7.2.diff/PW/src/plugin_initialization.f90
  417. lib/plumed/patches/qespresso-7.2.diff/PW/src/plugin_initialization.f90.preplumed
  418. lib/plumed/patches/qespresso-7.2.diff/PW/src/run_pwscf.f90
  419. lib/plumed/patches/qespresso-7.2.diff/PW/src/run_pwscf.f90.preplumed
  420. lib/plumed/plumed-config
  421. lib/plumed/plumed-mklib
  422. lib/plumed/plumed-newcv
  423. lib/plumed/plumed-partial_tempering
  424. lib/plumed/plumed-patch
  425. lib/plumed/plumed-runtime
  426. lib/plumed/plumed-selector
  427. lib/plumed/plumed-vim2html
  428. lib/plumed/scripts/config.sh
  429. lib/plumed/scripts/mklib.sh
  430. lib/plumed/scripts/newcv.sh
  431. lib/plumed/scripts/partial_tempering.sh
  432. lib/plumed/scripts/patch.sh
  433. lib/plumed/scripts/selector.sh
  434. lib/plumed/scripts/vim2html.sh
  435. lib/plumed/src/colvar/Template.cpp
  436. lib/plumed/src/config/compile_options.sh
  437. lib/plumed/src/config/config.txt
  438. lib/plumed/src/lib/Plumed.cmake
  439. lib/plumed/src/lib/Plumed.cmake.runtime
  440. lib/plumed/src/lib/Plumed.cmake.shared
  441. lib/plumed/src/lib/Plumed.cmake.static
  442. lib/plumed/src/lib/Plumed.inc
  443. lib/plumed/src/lib/Plumed.inc.runtime
  444. lib/plumed/src/lib/Plumed.inc.shared
  445. lib/plumed/src/lib/Plumed.inc.static
  446. lib/plumed/vim/help/ABMD.txt
  447. lib/plumed/vim/help/ADAPTIVE_PATH.txt
  448. lib/plumed/vim/help/ALPHABETA.txt
  449. lib/plumed/vim/help/ALPHARMSD.txt
  450. lib/plumed/vim/help/ANGLE.txt
  451. lib/plumed/vim/help/ANGLES.txt
  452. lib/plumed/vim/help/ANTIBETARMSD.txt
  453. lib/plumed/vim/help/AROUND.txt
  454. lib/plumed/vim/help/AVERAGE.txt
  455. lib/plumed/vim/help/BIASVALUE.txt
  456. lib/plumed/vim/help/BRIDGE.txt
  457. lib/plumed/vim/help/CALIBER.txt
  458. lib/plumed/vim/help/CAVITY.txt
  459. lib/plumed/vim/help/CELL.txt
  460. lib/plumed/vim/help/CENTER.txt
  461. lib/plumed/vim/help/CENTER_OF_MULTICOLVAR.txt
  462. lib/plumed/vim/help/COLLECT_FRAMES.txt
  463. lib/plumed/vim/help/COM.txt
  464. lib/plumed/vim/help/COMBINE.txt
  465. lib/plumed/vim/help/COMMITTOR.txt
  466. lib/plumed/vim/help/CONSTANT.txt
  467. lib/plumed/vim/help/CONTACTMAP.txt
  468. lib/plumed/vim/help/CONVERT_TO_FES.txt
  469. lib/plumed/vim/help/COORDINATION.txt
  470. lib/plumed/vim/help/COORDINATIONNUMBER.txt
  471. lib/plumed/vim/help/CS2BACKBONE.txt
  472. lib/plumed/vim/help/CUSTOM.txt
  473. lib/plumed/vim/help/DEBUG.txt
  474. lib/plumed/vim/help/DENSITY.txt
  475. lib/plumed/vim/help/DHENERGY.txt
  476. lib/plumed/vim/help/DIHCOR.txt
  477. lib/plumed/vim/help/DIMER.txt
  478. lib/plumed/vim/help/DIPOLE.txt
  479. lib/plumed/vim/help/DISTANCE.txt
  480. lib/plumed/vim/help/DISTANCES.txt
  481. lib/plumed/vim/help/DISTANCE_FROM_CONTOUR.txt
  482. lib/plumed/vim/help/DRMSD.txt
  483. lib/plumed/vim/help/DUMPATOMS.txt
  484. lib/plumed/vim/help/DUMPCUBE.txt
  485. lib/plumed/vim/help/DUMPDERIVATIVES.txt
  486. lib/plumed/vim/help/DUMPFORCES.txt
  487. lib/plumed/vim/help/DUMPGRID.txt
  488. lib/plumed/vim/help/DUMPMASSCHARGE.txt
  489. lib/plumed/vim/help/DUMPMULTICOLVAR.txt
  490. lib/plumed/vim/help/DUMPPROJECTIONS.txt
  491. lib/plumed/vim/help/EEFSOLV.txt
  492. lib/plumed/vim/help/EFFECTIVE_ENERGY_DRIFT.txt
  493. lib/plumed/vim/help/EMMI.txt
  494. lib/plumed/vim/help/ENDPLUMED.txt
  495. lib/plumed/vim/help/ENERGY.txt
  496. lib/plumed/vim/help/ENSEMBLE.txt
  497. lib/plumed/vim/help/ERMSD.txt
  498. lib/plumed/vim/help/EUCLIDEAN_DISSIMILARITIES.txt
  499. lib/plumed/vim/help/EXTENDED_LAGRANGIAN.txt
  500. lib/plumed/vim/help/EXTERNAL.txt
  501. lib/plumed/vim/help/EXTRACV.txt
  502. lib/plumed/vim/help/FAKE.txt
  503. lib/plumed/vim/help/FIND_CONTOUR.txt
  504. lib/plumed/vim/help/FIND_CONTOUR_SURFACE.txt
  505. lib/plumed/vim/help/FIND_SPHERICAL_CONTOUR.txt
  506. lib/plumed/vim/help/FIT_TO_TEMPLATE.txt
  507. lib/plumed/vim/help/FIXEDATOM.txt
  508. lib/plumed/vim/help/FLUSH.txt
  509. lib/plumed/vim/help/FOURIER_TRANSFORM.txt
  510. lib/plumed/vim/help/FRET.txt
  511. lib/plumed/vim/help/FUNCPATHGENERAL.txt
  512. lib/plumed/vim/help/FUNCPATHMSD.txt
  513. lib/plumed/vim/help/FUNCSUMHILLS.txt
  514. lib/plumed/vim/help/GHBFIX.txt
  515. lib/plumed/vim/help/GHOST.txt
  516. lib/plumed/vim/help/GPROPERTYMAP.txt
  517. lib/plumed/vim/help/GRID_TO_XYZ.txt
  518. lib/plumed/vim/help/GROUP.txt
  519. lib/plumed/vim/help/GYRATION.txt
  520. lib/plumed/vim/help/HISTOGRAM.txt
  521. lib/plumed/vim/help/INCLUDE.txt
  522. lib/plumed/vim/help/INCYLINDER.txt
  523. lib/plumed/vim/help/INENVELOPE.txt
  524. lib/plumed/vim/help/INPLANEDISTANCES.txt
  525. lib/plumed/vim/help/INSPHERE.txt
  526. lib/plumed/vim/help/INTEGRATE_GRID.txt
  527. lib/plumed/vim/help/INTERPOLATE_GRID.txt
  528. lib/plumed/vim/help/JCOUPLING.txt
  529. lib/plumed/vim/help/LANDMARK_SELECT_FPS.txt
  530. lib/plumed/vim/help/LANDMARK_SELECT_RANDOM.txt
  531. lib/plumed/vim/help/LANDMARK_SELECT_STAGED.txt
  532. lib/plumed/vim/help/LANDMARK_SELECT_STRIDE.txt
  533. lib/plumed/vim/help/LOAD.txt
  534. lib/plumed/vim/help/LOCALENSEMBLE.txt
  535. lib/plumed/vim/help/LOCAL_AVERAGE.txt
  536. lib/plumed/vim/help/LOWER_WALLS.txt
  537. lib/plumed/vim/help/MATHEVAL.txt
  538. lib/plumed/vim/help/MAXENT.txt
  539. lib/plumed/vim/help/MCOLV_COMBINE.txt
  540. lib/plumed/vim/help/MCOLV_PRODUCT.txt
  541. lib/plumed/vim/help/METAD.txt
  542. lib/plumed/vim/help/METAINFERENCE.txt
  543. lib/plumed/vim/help/MFILTER_BETWEEN.txt
  544. lib/plumed/vim/help/MFILTER_LESS.txt
  545. lib/plumed/vim/help/MFILTER_MORE.txt
  546. lib/plumed/vim/help/MOLINFO.txt
  547. lib/plumed/vim/help/MOVINGRESTRAINT.txt
  548. lib/plumed/vim/help/MTRANSFORM_BETWEEN.txt
  549. lib/plumed/vim/help/MTRANSFORM_LESS.txt
  550. lib/plumed/vim/help/MTRANSFORM_MORE.txt
  551. lib/plumed/vim/help/MULTICOLVARDENS.txt
  552. lib/plumed/vim/help/MULTI_RMSD.txt
  553. lib/plumed/vim/help/NLINKS.txt
  554. lib/plumed/vim/help/NOE.txt
  555. lib/plumed/vim/help/OUTPUT_ANALYSIS_DATA_TO_COLVAR.txt
  556. lib/plumed/vim/help/OUTPUT_ANALYSIS_DATA_TO_PDB.txt
  557. lib/plumed/vim/help/PARABETARMSD.txt
  558. lib/plumed/vim/help/PATH.txt
  559. lib/plumed/vim/help/PATHMSD.txt
  560. lib/plumed/vim/help/PBMETAD.txt
  561. lib/plumed/vim/help/PCARMSD.txt
  562. lib/plumed/vim/help/PCAVARS.txt
  563. lib/plumed/vim/help/PCS.txt
  564. lib/plumed/vim/help/PIECEWISE.txt
  565. lib/plumed/vim/help/PLUMED.txt
  566. lib/plumed/vim/help/POSITION.txt
  567. lib/plumed/vim/help/PRE.txt
  568. lib/plumed/vim/help/PRINT.txt
  569. lib/plumed/vim/help/PRINT_DISSIMILARITY_MATRIX.txt
  570. lib/plumed/vim/help/PROJECTION_ON_AXIS.txt
  571. lib/plumed/vim/help/PROPERTYMAP.txt
  572. lib/plumed/vim/help/PUCKERING.txt
  573. lib/plumed/vim/help/RANDOM_EXCHANGES.txt
  574. lib/plumed/vim/help/RDC.txt
  575. lib/plumed/vim/help/READ.txt
  576. lib/plumed/vim/help/READ_DISSIMILARITY_MATRIX.txt
  577. lib/plumed/vim/help/RESCALE.txt
  578. lib/plumed/vim/help/RESELECT_LANDMARKS.txt
  579. lib/plumed/vim/help/RESET_CELL.txt
  580. lib/plumed/vim/help/RESTART.txt
  581. lib/plumed/vim/help/RESTRAINT.txt
  582. lib/plumed/vim/help/REWEIGHT_BIAS.txt
  583. lib/plumed/vim/help/REWEIGHT_METAD.txt
  584. lib/plumed/vim/help/REWEIGHT_TEMP_PRESS.txt
  585. lib/plumed/vim/help/REWEIGHT_WHAM.txt
  586. lib/plumed/vim/help/RMSD.txt
  587. lib/plumed/vim/help/SANS.txt
  588. lib/plumed/vim/help/SAXS.txt
  589. lib/plumed/vim/help/SELECT.txt
  590. lib/plumed/vim/help/SELECTOR.txt
  591. lib/plumed/vim/help/SORT.txt
  592. lib/plumed/vim/help/STATS.txt
  593. lib/plumed/vim/help/TARGET.txt
  594. lib/plumed/vim/help/TEMPLATE.txt
  595. lib/plumed/vim/help/TETRAHEDRALPORE.txt
  596. lib/plumed/vim/help/TIME.txt
  597. lib/plumed/vim/help/TORSION.txt
  598. lib/plumed/vim/help/TORSIONS.txt
  599. lib/plumed/vim/help/UNITS.txt
  600. lib/plumed/vim/help/UPDATE_IF.txt
  601. lib/plumed/vim/help/UPPER_WALLS.txt
  602. lib/plumed/vim/help/VOLUME.txt
  603. lib/plumed/vim/help/WHAM_HISTOGRAM.txt
  604. lib/plumed/vim/help/WHAM_WEIGHTS.txt
  605. lib/plumed/vim/help/WHOLEMOLECULES.txt
  606. lib/plumed/vim/help/WRAPAROUND.txt
  607. lib/plumed/vim/help/XANGLES.txt
  608. lib/plumed/vim/help/XDISTANCES.txt
  609. lib/plumed/vim/help/XYDISTANCES.txt
  610. lib/plumed/vim/help/XYTORSIONS.txt
  611. lib/plumed/vim/help/XZDISTANCES.txt
  612. lib/plumed/vim/help/XZTORSIONS.txt
  613. lib/plumed/vim/help/YANGLES.txt
  614. lib/plumed/vim/help/YDISTANCES.txt
  615. lib/plumed/vim/help/YXTORSIONS.txt
  616. lib/plumed/vim/help/YZDISTANCES.txt
  617. lib/plumed/vim/help/YZTORSIONS.txt
  618. lib/plumed/vim/help/ZANGLES.txt
  619. lib/plumed/vim/help/ZDISTANCES.txt
  620. lib/plumed/vim/help/ZXTORSIONS.txt
  621. lib/plumed/vim/help/ZYTORSIONS.txt
  622. lib/plumed/vim/scripts.vim
  623. lib/plumed/vim/syntax/plumed.vim
  624. lib/plumed/vim/syntax/plumedf.vim
  625. libdata/pkgconfig/plumed.pc
  626. libdata/pkgconfig/plumedInternals.pc
  627. libdata/pkgconfig/plumedWrapper.pc
  628. @owner
  629. @group
  630. @mode
Collapse this list.
Dependency lines:
  • plumed>0:science/plumed
To install the port:
cd /usr/ports/science/plumed/ && make install clean
To add the package, run one of these commands:
  • pkg install science/plumed
  • pkg install plumed
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: plumed
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1737474140 SHA256 (plumed-2.9.3.tgz) = 2ba5095bc7c7cfde1ca95780c1240d852b7dc1b00c9de5b31e607120449ff827 SIZE (plumed-2.9.3.tgz) = 118993592

Packages (timestamps in pop-ups are UTC):
plumed
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest2.9.3_12.9.3_12.7.02.9.3_1--2.7.0-
FreeBSD:13:quarterly2.8.0_22.8.0_2-2.8.0_2--2.8.0_22.8.0_2
FreeBSD:14:latest2.9.3_12.9.3_1-2.8.0_2----
FreeBSD:14:quarterly2.8.0_22.8.0_2-2.8.0_2--2.8.0_22.8.0_2
FreeBSD:15:latest2.9.3_12.9.3_1n/a2.9.3_1n/a-2.8.0_22.8.0_2
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. bash : shells/bash
  2. gmake>=4.4.1 : devel/gmake
  3. pkgconf>=1.3.0_1 : devel/pkgconf
  4. autoconf>=2.72 : devel/autoconf
  5. automake>=1.17 : devel/automake
Test dependencies:
  1. gawk : lang/gawk
Runtime dependencies:
  1. bash : shells/bash
Library dependencies:
  1. libblas.so : math/blas
  2. libfftw3.so : math/fftw3
  3. libgsl.so : math/gsl
  4. liblapack.so : math/lapack
This port is required by:
for Libraries
  1. science/dftbplus
  2. science/lammps

Configuration Options:
No options to configure
Options name:
science_plumed
USES:
autoreconf compiler:c++11-lang gmake localbase pkgconfig shebangfix tar:tgz
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://github.com/plumed/plumed2/releases/download/v2.9.3/
Collapse this list.

Number of commits found: 23

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.9.3_1
24 Jan 2025 12:18:28
commit hash: 6cce1f5b223a907deb0498a9d069816ce78b75e1commit hash: 6cce1f5b223a907deb0498a9d069816ce78b75e1commit hash: 6cce1f5b223a907deb0498a9d069816ce78b75e1commit hash: 6cce1f5b223a907deb0498a9d069816ce78b75e1 files touched by this commit
Thierry Thomas (thierry) search for other commits by this committer
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2.9.3
21 Jan 2025 16:08:20
commit hash: 7152bd700722cae852dd889f89ad667dfc2939cfcommit hash: 7152bd700722cae852dd889f89ad667dfc2939cfcommit hash: 7152bd700722cae852dd889f89ad667dfc2939cfcommit hash: 7152bd700722cae852dd889f89ad667dfc2939cf files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: update 2.8.0 → 2.9.3
2.8.0_2
01 Jan 2024 11:49:51
commit hash: f2489ab0c721f5ec60a9f8074e904cfbe5d21dfdcommit hash: f2489ab0c721f5ec60a9f8074e904cfbe5d21dfdcommit hash: f2489ab0c721f5ec60a9f8074e904cfbe5d21dfdcommit hash: f2489ab0c721f5ec60a9f8074e904cfbe5d21dfd files touched by this commit
Thierry Thomas (thierry) search for other commits by this committer
*/*: chase the upgrade of BLAS / LAPACK to 3.12.0

PR:		275860
2.8.0_1
23 Apr 2023 09:09:58
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b files touched by this commit
Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
2.8.0
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.8.0
23 May 2022 11:39:54
commit hash: 8560babc8acaaf83032e9549b8953c7bfd1677b7commit hash: 8560babc8acaaf83032e9549b8953c7bfd1677b7commit hash: 8560babc8acaaf83032e9549b8953c7bfd1677b7commit hash: 8560babc8acaaf83032e9549b8953c7bfd1677b7 files touched by this commit
Daniel Engberg (diizzy) search for other commits by this committer
science/plumed: Use upsteam release archive

Use upstream release archive as recommended by Porters Handbook

PR:		264023
Approved by:	yuri (maintainer)
2.8.0
23 Feb 2022 17:02:06
commit hash: 265b2b6c62dd4a18440d88bf62ecb21034f29b87commit hash: 265b2b6c62dd4a18440d88bf62ecb21034f29b87commit hash: 265b2b6c62dd4a18440d88bf62ecb21034f29b87commit hash: 265b2b6c62dd4a18440d88bf62ecb21034f29b87 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Update 2.8b -> 2.8.0

Reported by:	portscout
2.8.b_2
12 Jan 2022 19:41:22
commit hash: 654acd81409d31495f8b1b11db61e1afbf640981commit hash: 654acd81409d31495f8b1b11db61e1afbf640981commit hash: 654acd81409d31495f8b1b11db61e1afbf640981commit hash: 654acd81409d31495f8b1b11db61e1afbf640981 files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
math/gsl: bump portrevision of consumers after update to 2.7.1

PR:		260201
2.8.b_1
05 Jan 2022 01:31:24
commit hash: 521a9557f0bb69046cffd25dfd76a3ff3798bd99commit hash: 521a9557f0bb69046cffd25dfd76a3ff3798bd99commit hash: 521a9557f0bb69046cffd25dfd76a3ff3798bd99commit hash: 521a9557f0bb69046cffd25dfd76a3ff3798bd99 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Add missing dependencies and binary alias which fixes most
tests.
2.8.b
04 Jan 2022 22:30:11
commit hash: 29c3e2e6e1de61d7811499849a3755aa5e40bbdbcommit hash: 29c3e2e6e1de61d7811499849a3755aa5e40bbdbcommit hash: 29c3e2e6e1de61d7811499849a3755aa5e40bbdbcommit hash: 29c3e2e6e1de61d7811499849a3755aa5e40bbdb files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Fix the test target
2.8.b
04 Jan 2022 07:11:22
commit hash: 1e450a952cb8dcc8270dbb1d5fee8e301d39d98ecommit hash: 1e450a952cb8dcc8270dbb1d5fee8e301d39d98ecommit hash: 1e450a952cb8dcc8270dbb1d5fee8e301d39d98ecommit hash: 1e450a952cb8dcc8270dbb1d5fee8e301d39d98e files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Update 2.7.2 -> 2.8b
2.7.2
02 Sep 2021 18:09:29
commit hash: 58f45200bc83594c793dab6d1bb65347f061c6bfcommit hash: 58f45200bc83594c793dab6d1bb65347f061c6bfcommit hash: 58f45200bc83594c793dab6d1bb65347f061c6bfcommit hash: 58f45200bc83594c793dab6d1bb65347f061c6bf files touched by this commit
Adam Weinberger (adamw) search for other commits by this committer
many: Depend on vim instead of vim-console
2.7.2
28 Jul 2021 17:13:47
commit hash: 3ab9c7e06555a6f9c6e28b1016ab432af6a2c7c3commit hash: 3ab9c7e06555a6f9c6e28b1016ab432af6a2c7c3commit hash: 3ab9c7e06555a6f9c6e28b1016ab432af6a2c7c3commit hash: 3ab9c7e06555a6f9c6e28b1016ab432af6a2c7c3 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Update 2.7.1 -> 2.7.2

Reported by:	portscout
2.7.1
17 Apr 2021 04:00:57
commit hash: 70eb5bbeb0ab2c8f4cf1ece3242eb552db1f1c3acommit hash: 70eb5bbeb0ab2c8f4cf1ece3242eb552db1f1c3acommit hash: 70eb5bbeb0ab2c8f4cf1ece3242eb552db1f1c3acommit hash: 70eb5bbeb0ab2c8f4cf1ece3242eb552db1f1c3a files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/plumed: Update 2.7.0 -> 2.7.1

Reported by:	portscout
2.7.0
07 Apr 2021 08:09:01
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
2.7.0
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
2.7.0
03 Jan 2021 06:32:47
Revision:559994Original commit files touched by this commit
yuri search for other commits by this committer
science/plumed: Update 2.6.2 -> 2.7.0

Reported by:	portscout
2.6.2
28 Oct 2020 01:33:15
Revision:553521Original commit files touched by this commit
yuri search for other commits by this committer
science/plumed: Update 2.6.1 -> 2.6.2

Reported by:	portscout
2.6.1
16 Jul 2020 19:51:31
Revision:542385Original commit files touched by this commit
yuri search for other commits by this committer
science/plumed: Update 2.6.0 -> 2.6.1

Reported by:	portscout
2.6.0
23 May 2020 21:59:28
Revision:536357Original commit files touched by this commit
yuri search for other commits by this committer
science/plumed: Broken on i386

Reported by:	fallout
2.6.0
06 May 2020 12:00:53
Revision:534167Original commit files touched by this commit
linimon search for other commits by this committer
Add compiler:c++11-lang to USES to fix build on GCC-based systems:

  core/../../core/tools/../../tools/Vector.h:27:17: error: array: No such file
or directory
2.6.0
04 May 2020 19:55:51
Revision:533981Original commit files touched by this commit
yuri search for other commits by this committer
New port: science/plumed: PLUgin for MolEcular Dynamics

Number of commits found: 23