Port details |
- py-hcluster Hierarchical Clustering Package For Scipy
- 0.2.0_11 science
=0 0.2.0_11Version of this port present on the latest quarterly branch. DEPRECATED: Unmaintained, uses EOLed python27
This port expired on: 2020-01-27
- There is no maintainer for this port.
- Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
 - Port Added: 2008-09-26 23:25:08
- Last Update: 2020-01-27 15:34:18
- SVN Revision: 524263
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- http://code.google.com/p/scipy-cluster/
- Description:
- py-hcluster library provides Python functions for
agglomerative clustering. Its features include
* generating hierarchical clusters from distance matrices
* computing distance matrices from observation vectors
* computing statistics on clusters
* cutting linkages to generate flat clusters
* and visualizing clusters with dendrograms.
The interface is very similar to MATLAB's Statistics
Toolbox API to make code easier to port from MATLAB to
Python/Numpy. The core implementation of this library
is in C for efficiency.
WWW: http://code.google.com/p/scipy-cluster/
cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}hcluster>0:science/py-hcluster@${PY_FLAVOR}
- No installation instructions:
- This port has been deleted.
- PKGNAME: py27-hcluster
- Package flavors (<flavor>: <package>)
- distinfo:
- SHA256 (hcluster-0.2.0.tar.gz) = ce1ff67271cc1be36522ec1b144722c62ab74e48b9051a47b0f439b1eb372652
SIZE (hcluster-0.2.0.tar.gz) = 453082
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:

- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py27-numpy>0 : math/py-numpy@py27
- py27-matplotlib>0 : math/py-matplotlib@py27
- py27-setuptools>0 : devel/py-setuptools@py27
- python2.7 : lang/python27
- Runtime dependencies:
-
- py27-numpy>0 : math/py-numpy@py27
- py27-matplotlib>0 : math/py-matplotlib@py27
- py27-setuptools>0 : devel/py-setuptools@py27
- python2.7 : lang/python27
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- N/A
- USES:
- python:2.7
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
0.2.0_11 27 Jan 2020 15:34:18
  |
rene  |
Remove expired ports:
2020-01-27 accessibility/py-papi: Unmaintained, uses EOLed python27
2020-01-27 archivers/py-czipfile: Unmaintained, uses EOLed python27
2020-01-27 audio/boodler: Unmaintained, uses EOLed python27
2020-01-27 audio/dir2ogg: Unmaintained, uses EOLed python27
2020-01-27 audio/jokosher: Unmaintained, uses EOLed python27
2020-01-27 audio/mpdbrowser: Unmaintained, uses EOLed python27
2020-01-27 audio/nekobee: Unmaintained, uses EOLed python27
2020-01-27 audio/patchage: Unmaintained, uses EOLed python27
2020-01-27 audio/py-ao: Unmaintained, uses EOLed python27
2020-01-27 audio/py-id3: Unmaintained, uses EOLed python27
2020-01-27 audio/py-shout: Unmaintained, uses EOLed python27
2020-01-27 audio/py-speex: Unmaintained, uses EOLed python27
2020-01-27 audio/pytone: Unmaintained, uses EOLed python27 (Only the first 15 lines of the commit message are shown above ) |
0.2.0_11 26 Dec 2019 07:54:29
  |
antoine  |
Deprecate a few ports
With hat: portmgr |
0.2.0_11 26 Jul 2019 20:46:57
  |
gerald  |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
0.2.0_10 12 Dec 2018 01:35:36
  |
gerald  |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
0.2.0_9 20 Jun 2018 17:05:44
  |
mat  |
Use PY_FLAVOR for dependencies.
FLAVOR is the current port's flavor, it should not be used outside of
this scope.
Sponsored by: Absolight |
0.2.0_9 10 Mar 2018 17:46:06
  |
gerald  |
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079). |
0.2.0_8 30 Nov 2017 15:50:34
  |
mat  |
Convert Python ports to FLAVORS.
Ports using USE_PYTHON=distutils are now flavored. They will
automatically get flavors (py27, py34, py35, py36) depending on what
versions they support.
There is also a USE_PYTHON=flavors for ports that do not use distutils
but need FLAVORS to be set. A USE_PYTHON=noflavors can be set if
using distutils but flavors are not wanted.
A new USE_PYTHON=optsuffix that will add PYTHON_PKGNAMESUFFIX has been
added to cope with Python ports that did not have the Python
PKGNAMEPREFIX but are flavored.
USES=python now also exports a PY_FLAVOR variable that contains the (Only the first 15 lines of the commit message are shown above ) |
0.2.0_8 19 May 2016 10:53:06
  |
amdmi3  |
- Fix trailing whitespace in pkg-descrs, categories [p-x]*
Approved by: portmgr blanket |
0.2.0_8 01 Apr 2016 14:25:18
  |
mat  |
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.
With hat: portmgr
Sponsored by: Absolight |
0.2.0_8 14 Sep 2015 12:20:10
  |
amdmi3  |
- Add LICENSE
- Pet portlint
- Strip library
- Regenerate patches with `make makepatch`
- Fix WWW: |
0.2.0_7 11 Sep 2015 02:49:29
  |
wen  |
- Reset the maintainer to ports@ |
0.2.0_7 23 Jan 2015 15:21:52
  |
antoine  |
Canonicalize some dependencies on numpy |
0.2.0_7 24 Oct 2014 16:50:43
  |
mva  |
- Convert ports of science/ and security to new USES=python
Approved by: portmgr (implicit) |
0.2.0_7 10 Sep 2014 20:50:37
  |
gerald  |
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit) |
0.2.0_6 26 Jun 2014 14:27:46
  |
wg  |
science/py-hcluster: support stage
- Remove leading article from COMMENT
- Use auto plist
Approved by: portmgt (stage blanket) |
0.2.0_6 10 Mar 2014 20:55:22
  |
gerald  |
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.
Part II, Bump PORTREVISIONs.
PR: 182136
Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by: bdrewery (two -exp runs) |
0.2.0_5 26 Oct 2013 00:52:36
  |
gerald  |
Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
- #14669: Fixed extraction of CC from gmp.h.
- Fixed case of intermediate zero real or imaginary part in mpc_fma,
found by hydra with GMP_CHECK_RANDOMIZE=1346362345.
This is on top of the following changes from version 1.0
- Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
invariant sections) for the documentation.
- 100% of all lines are covered by tests
- Renamed functions
. mpc_mul_2exp to mpc_mul_2ui
. mpc_div_2exp to mpc_div_2ui (Only the first 15 lines of the commit message are shown above ) |
0.2.0_4 20 Sep 2013 22:48:31
  |
bapt  |
Add NO_STAGE all over the place in preparation for the staging support (cat:
science) |
0.2.0_4 01 Jun 2012 05:26:28
 |
dinoex  |
- update png to 1.5.10 |
0.2.0_3 21 Jan 2012 17:40:15
 |
eadler  |
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.
Explicit duplication > := > = and this just moves ports one step to the left
Approved by: portmgr |
0.2.0_3 03 Jul 2011 13:22:25
 |
ohauer  |
- remove MD5 |
0.2.0_3 28 Mar 2010 06:47:48
 |
dinoex  |
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi |
0.2.0_2 05 Feb 2010 11:46:55
 |
dinoex  |
- update to jpeg-8 |
0.2.0_1 31 Jul 2009 13:57:52
 |
dinoex  |
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by: edwin |
0.2.0 22 Dec 2008 21:10:33
 |
miwi  |
- Update to 0.2.0
PR: 129652
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
0.1.9 26 Sep 2008 23:21:54
 |
miwi  |
py-hcluster library provides Python functions for
agglomerative clustering. Its features include
* generating hierarchical clusters from distance matrices
* computing distance matrices from observation vectors
* computing statistics on clusters
* cutting linkages to generate flat clusters
* and visualizing clusters with dendrograms.
The interface is very similar to MATLAB's Statistics
Toolbox API to make code easier to port from MATLAB to
Python/Numpy. The core implementation of this library
is in C for efficiency.
WWW: http://code.google.com/p/scipy-cluster/
PR: ports/127515
Submitted by: Wen Heping <wenheping at gmail.com> |