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Port details
py-morphio Neuron morphology IO library
3.4.2 science Σ=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.4.2Version of this port present on the latest quarterly branch. upstream: 3.5.1A newer version was found upstream by portscout, first on 2026-10-29.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2026-05-01 00:51:11
Last Update: 2026-05-01 00:50:29
Commit Hash: 3e0fa24
Also Listed In: python
License: APACHE20
WWW:
https://github.com/openbraininstitute/MorphIO
Description: #
MorphIO is a library for reading and writing neuron morphology files. It supports the following formats: SWC ASC (aka. neurolucida) H5 v1 H5 v2 is not supported anymore, see H5v2
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port
Manual pages: #
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist #
There is no configure plist information for this port.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}morphio>0:science/py-morphio@${PY_FLAVOR}
To install the port: #
cd /usr/ports/science/py-morphio/ && make install clean
To add the package, run one of these commands:
  • pkg install science/py-morphio
  • pkg install py311-morphio
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py311-morphio listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py311-morphio
Package flavors (<flavor>: <package>) #
  • py311: py311-morphio
distinfo: #
TIMESTAMP = 1776477304 SHA256 (morphio-3.4.2.tar.gz) = 4521b01dd8de8ff98b44341318cee44d75552dfd58b95a0e82ebfffe653b88f8 SIZE (morphio-3.4.2.tar.gz) = 690093
Packages (timestamps in pop-ups are UTC): #
py312-morphio
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest3.4.23.4.2--3.4.2
FreeBSD:14:quarterly3.4.23.4.2--3.4.2
FreeBSD:15:latest3.4.23.4.2n/a-n/a
FreeBSD:15:quarterly3.4.23.4.2n/a-n/a
FreeBSD:16:latest3.4.23.4.2n/a-n/a
Dependencies #
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies: #
  1. py311-setuptools>=61.0 : devel/py-setuptools@py311
  2. py311-setuptools-scm>0 : devel/py-setuptools-scm@py311
  3. py311-wheel>0 : devel/py-wheel@py311
  4. cmake : devel/cmake-core
  5. ninja : devel/ninja
  6. pybind11>0 : devel/pybind11
  7. python3.11 : lang/python311
  8. py311-build>=0 : devel/py-build@py311
  9. py311-installer>=0 : devel/py-installer@py311
Test dependencies: #
  1. python3.11 : lang/python311
Runtime dependencies: #
  1. python3.11 : lang/python311
Library dependencies: #
  1. libhdf5.so : science/hdf5
There are no ports dependent upon this port #
Configuration Options: #
No options to configure
Options name: #
science_py-morphio
USES: #
python
pkg-message: #
FreshPorts was unable to extract/find any pkg message
Master Sites: #
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/m/morphio/
  2. https://pypi.org/packages/source/m/morphio/
Collapse this list.

Number of commits found: 1 #

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
3.4.2
01 May 2026 00:50:29
commit hash: 3e0fa24d33e9f9bb3f7433a3b07e2e888d1b0043commit hash: 3e0fa24d33e9f9bb3f7433a3b07e2e888d1b0043commit hash: 3e0fa24d33e9f9bb3f7433a3b07e2e888d1b0043commit hash: 3e0fa24d33e9f9bb3f7433a3b07e2e888d1b0043 files touched by this commit		 Wen Heping (wen) search for other commits by this committer 
science/py-morphio: New port

MorphIO is a library for reading and writing neuron morphology files.
It supports the following formats:

SWC
ASC (aka. neurolucida)
H5 v1
H5 v2 is not supported anymore, see H5v2

Number of commits found: 1

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