notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photosAll times are UTC
Ukraine
Port details
py-nglview IPython widget to view molecular structures and trajectories
3.1.2 science on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.1.2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-08-01 09:45:36
Last Update: 2024-04-20 08:34:04
Commit Hash: c4f7a20
People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
Also Listed In: python
License: MIT
WWW:
http://nglviewer.org/nglview/latest/
Description:
nglview is an IPython/Jupyter widget to interactively view molecular structures and trajectories. Utilizes the embeddable NGL Viewer for rendering. Support for showing data from the file-system, RCSB PDB, simpletraj and from objects of analysis libraries mdtraj, pytraj, mdanalysis, ParmEd, rdkit, ase, HTMD, biopython, cctbx, pyrosetta, schrodinger's Structure.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}nglview>0:science/py-nglview@${PY_FLAVOR}
To install the port:
cd /usr/ports/science/py-nglview/ && make install clean
To add the package, run one of these commands:
  • pkg install science/py-nglview
  • pkg install py39-nglview
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-nglview listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py39-nglview
Package flavors (<flavor>: <package>)
  • py39: py39-nglview
distinfo:
TIMESTAMP = 1713599805 SHA256 (nglview-3.1.2.tar.gz) = 7f672efa2b6ca0db34de968e5b5766b14b1b3dade212d2f8a083c600a11345ce SIZE (nglview-3.1.2.tar.gz) = 5477602

Packages (timestamps in pop-ups are UTC):
py39-nglview
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest--------
FreeBSD:13:quarterly-----3.0.73.0.73.0.7
FreeBSD:14:latest--------
FreeBSD:14:quarterly-----3.0.73.0.73.0.7
FreeBSD:15:latest--n/a-n/a3.0.73.0.73.0.7
 

py311-nglview
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest3.1.23.1.2-3.1.23.1.2---
FreeBSD:13:quarterly3.1.23.1.2-3.1.23.1.2---
FreeBSD:14:latest3.1.23.1.2-3.1.23.1.2---
FreeBSD:14:quarterly3.1.23.1.2-3.1.23.1.2---
FreeBSD:15:latest3.1.23.1.2n/a3.1.2n/a---
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py39-jupyter-packaging>=0.7.9 : devel/py-jupyter-packaging@py39
  2. py39-setuptools>0 : devel/py-setuptools@py39
  3. py39-versioneer-518>0 : devel/py-versioneer-518@py39
  4. py39-wheel>0 : devel/py-wheel@py39
  5. python3.9 : lang/python39
  6. py39-build>=0 : devel/py-build@py39
  7. py39-installer>=0 : devel/py-installer@py39
Test dependencies:
  1. py39-ipywidgets>0 : devel/py-ipywidgets@py39
  2. py39-pytest>=7,1 : devel/py-pytest@py39
  3. python3.9 : lang/python39
Runtime dependencies:
  1. python3.9 : lang/python39
This port is required by:
for Run
  1. science/py-qcelemental

Configuration Options:
No options to configure
Options name:
science_py-nglview
USES:
python
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/n/nglview/
  2. https://pypi.org/packages/source/n/nglview/
Collapse this list.

Number of commits found: 3

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
3.1.2
20 Apr 2024 08:34:04
commit hash: c4f7a200c968c1c438669f517f9520e04293487acommit hash: c4f7a200c968c1c438669f517f9520e04293487acommit hash: c4f7a200c968c1c438669f517f9520e04293487acommit hash: c4f7a200c968c1c438669f517f9520e04293487a files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-nglview: update 3.0.7 → 3.1.2

Reported by:	portscout
3.0.7
02 Sep 2023 06:41:09
commit hash: 03b823cbd481603fd83c1953d2969e219f5e6df2commit hash: 03b823cbd481603fd83c1953d2969e219f5e6df2commit hash: 03b823cbd481603fd83c1953d2969e219f5e6df2commit hash: 03b823cbd481603fd83c1953d2969e219f5e6df2 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-nglview: update 3.0.6 → 3.0.7

Reported by:	portscout
3.0.6
01 Aug 2023 09:43:04
commit hash: a275c86efd8d9045a96d3b50c9450c9535ff3ab8commit hash: a275c86efd8d9045a96d3b50c9450c9535ff3ab8commit hash: a275c86efd8d9045a96d3b50c9450c9535ff3ab8commit hash: a275c86efd8d9045a96d3b50c9450c9535ff3ab8 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-nglview: New port: IPython widget to view molecular structures and
trajectories

Number of commits found: 3