| Port details |
- py-nilearn Statistical learning for neuroimaging in Python
- 0.10.4 science
 =2      0.10.3Version of this port present on the latest quarterly branch.  DEPRECATED: Depends on expired devel/py-codecov
 EXPIRATION DATE: 2024-12-31
- Maintainer: yuri@FreeBSD.org
- Port Added: 2021-01-21 03:53:55
- Last Update: 2024-09-30 19:37:15
- Commit Hash: f49cd2f
- People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- https://nilearn.github.io/
- Description:
- Nilearn enables approachable and versatile analyses of brain volumes. It
provides statistical and machine-learning tools, with instructive documentation
& open community.
It supports general linear model (GLM) based analysis and leverages the
scikit-learn Python toolbox for multivariate statistics with applications such
as predictive modelling, classification, decoding, or connectivity analysis.
Nilearn now includes the functionality of Nistats. Here's a guide to replacing
Nistats imports to work in Nilearn.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}nilearn>0:science/py-nilearn@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/science/py-nilearn/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-nilearn
- pkg install py311-nilearn
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py311-nilearn listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py311-nilearn
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1726458750
SHA256 (nilearn-0.10.4.tar.gz) = 9450bd56a776d997b324f45dd18bf96e89bd8d80160974fcc759333fbaea35c2
SIZE (nilearn-0.10.4.tar.gz) = 12442599
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py311-hatch-vcs>0 : devel/py-hatch-vcs@py311
- py311-hatchling>0 : devel/py-hatchling@py311
- python3.11 : lang/python311
- py311-build>=0 : devel/py-build@py311
- py311-installer>=0 : devel/py-installer@py311
- Test dependencies:
-
- py311-pytest>0 : devel/py-pytest@py311
- py311-pytest-cov>=0 : devel/py-pytest-cov@py311
- python3.11 : lang/python311
- Runtime dependencies:
-
- py311-codecov>0 : devel/py-codecov@py311
- py311-joblib>=1.0.0 : devel/py-joblib@py311
- py311-lxml>0 : devel/py-lxml@py311
- py311-matplotlib>0 : math/py-matplotlib@py311
- py311-nibabel>=4.0.0 : science/py-nibabel@py311
- py311-numpy>=1.16,1<1.27,1 : math/py-numpy@py311
- py311-packaging>0 : devel/py-packaging@py311
- py311-pandas>=1.1.5 : math/py-pandas@py311
- py311-requests>=2.25.0 : www/py-requests@py311
- py311-scikit-learn>=1.0.0 : science/py-scikit-learn@py311
- py311-scipy>=1.8.0 : science/py-scipy@py311
- bash : shells/bash
- python3.11 : lang/python311
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- science_py-nilearn
- USES:
- python shebangfix
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
0.10.4
30 Sep 2024 19:37:15
 |
Rene Ladan (rene) |
science/py-nilearn: expire on 2024-12-31 for devel/py-codecov |
0.10.4
16 Sep 2024 07:48:26
|
Yuri Victorovich (yuri) |
science/py-nilearn: update 0.10.3 → 0.10.4
Reported by: portscout |
0.10.3
30 Jan 2024 08:56:28
|
Yuri Victorovich (yuri) |
science/py-nilearn: update 0.10.1 → 0.10.3
Reported by: portscout |
0.10.1
27 Jun 2023 19:34:34
|
Rene Ladan (rene) |
all: remove explicit versions in USES=python for "3.x+"
The logic in USES=python will automatically convert this to 3.8+ by
itself.
Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.
finance/quickfix: mark BROKEN with PYTHON
libtool: compile: c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
^~~~~~~~~~
1 warning and 1 error generated.
Reviewed by: portmgr, vishwin, yuri
Differential Revision: <https://reviews.freebsd.org/D40568> |
0.10.1
27 Jun 2023 04:41:40
|
Yuri Victorovich (yuri) |
science/py-nilearn: Update 0.8.1 → 0.10.1
Reported by: portscout |
0.8.1_1
23 Apr 2023 09:09:58
|
Gerald Pfeifer (gerald) |
*: Bump PORTREVISIONs for math/mpc update to 1.3.1 |
0.8.1
11 Jan 2023 15:58:34
|
Dmitry Marakasov (amdmi3) |
*/*: rename CHEESESHOP to PYPI in MASTER_SITES
PR: 267994
Differential revision: D37518
Approved by: bapt |
07 Sep 2022 21:58:51
|
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
0.8.1
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
0.8.1
16 Jul 2022 06:41:57
|
Yuri Victorovich (yuri) |
science/py-nilearn: Add comment |
0.8.1
23 Mar 2022 11:44:26
|
Dmitry Marakasov (amdmi3) |
science/py-nilearn: mark BROKEN
Approved by: portmgr blanket |
0.8.1
18 Sep 2021 17:48:28
|
Yuri Victorovich (yuri) |
science/py-nilearn: Update 0.8.0 -> 0.8.1
Reported by: portscout |
0.8.0
18 Jun 2021 17:16:59
|
Yuri Victorovich (yuri) |
science/py-nilearn: Update 0.7.1 -> 0.8.0
Reported by: portscout |
0.7.1
18 Apr 2021 00:57:38
|
Yuri Victorovich (yuri) |
science/py-nilearn: Update 0.7.0 -> 0.7.1
Reported by: portscout |
0.7.0
07 Apr 2021 08:09:01
|
Mathieu Arnold (mat) |
One more small cleanup, forgotten yesterday.
Reported by: lwhsu |
0.7.0
06 Apr 2021 14:31:07
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
0.7.0
30 Jan 2021 13:37:03
 |
sunpoet |
Update USES=python: math/py-pandas 1.2.0 requires Python 3.7+
PR: 250103 |
0.7.0
21 Jan 2021 03:53:48
|
yuri |
New port: science/py-nilearn: Statistical learning for neuroimaging in Python |
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