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Port details
py-py3Dmol IPython interface for embedding 3Dmol.js views
2.5.5 science Σ=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.4.2_1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-06-15 20:57:13
Last Update: 2026-10-24 20:19:36
Commit Hash: ca574e7
Also Listed In: python
License: WTFPL
WWW:
https://3dmol.csb.pitt.edu/
Description: #
py3Dmol is an IPython interface for embedding 3Dmol.js views.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port
Manual pages: #
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist #
There is no configure plist information for this port.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}py3Dmol>0:science/py-py3Dmol@${PY_FLAVOR}
To install the port: #
cd /usr/ports/science/py-py3Dmol/ && make install clean
To add the package, run one of these commands:
  • pkg install science/py-py3Dmol
  • pkg install py312-py3Dmol
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py312-py3Dmol listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py312-py3Dmol
Package flavors (<flavor>: <package>) #
  • py312: py312-py3Dmol
distinfo: #
TIMESTAMP = 1792414161 SHA256 (py3dmol-2.5.5.tar.gz) = cb102cc3370800a9ca7679774759f008e34a0f3a283778d85b0410849d370298 SIZE (py3dmol-2.5.5.tar.gz) = 7832

Packages (timestamps in pop-ups are UTC): #
py39-py3Dmol
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest--1.8.1--
FreeBSD:14:quarterly-----
FreeBSD:15:latest--n/a-n/a
FreeBSD:15:quarterly--n/a-n/a
FreeBSD:16:latest--n/a-n/a
 
py311-py3Dmol
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest---2.4.2_1-
FreeBSD:14:quarterly---2.4.2_1-
FreeBSD:15:latest--n/a2.4.2_1n/a
FreeBSD:15:quarterly--n/a-n/a
FreeBSD:16:latest--n/a-n/a
 
py312-py3Dmol
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest2.5.52.5.5--2.5.5
FreeBSD:14:quarterly2.4.2_12.4.2_1--2.4.2_1
FreeBSD:15:latest2.5.52.5.5n/a-n/a
FreeBSD:15:quarterly2.4.2_12.4.2_1n/a-n/a
FreeBSD:16:latest2.5.52.5.5n/a-n/a
 
Dependencies #
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies: #
  1. py312-setuptools>0 : devel/py-setuptools@py312
  2. py312-wheel>=0 : devel/py-wheel@py312
  3. python3.12 : lang/python312
  4. py312-build>=0 : devel/py-build@py312
  5. py312-installer>=0 : devel/py-installer@py312
Test dependencies: #
  1. python3.12 : lang/python312
Runtime dependencies: #
  1. py312-ipython>0 : devel/ipython@py312
  2. python3.12 : lang/python312
This port is required by: #
for Test #
  1. science/py-qcelemental

Configuration Options: #
No options to configure
Options name: #
science_py-py3Dmol
USES: #
python
pkg-message: #
FreshPorts was unable to extract/find any pkg message
Master Sites: #
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/py3dmol/
  2. https://pypi.org/packages/source/p/py3dmol/
Collapse this list.

Number of commits found: 10 #

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.5.5
24 Oct 2026 20:19:36
commit hash: ca574e7630e503c8e593c48128ae35b3451a4796commit hash: ca574e7630e503c8e593c48128ae35b3451a4796commit hash: ca574e7630e503c8e593c48128ae35b3451a4796commit hash: ca574e7630e503c8e593c48128ae35b3451a4796 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: update 2.4.2 → 2.5.5
2.4.2_1
08 Mar 2025 04:05:21
commit hash: 06a08e69f3acb846ad8252945f53c3a2d211e303commit hash: 06a08e69f3acb846ad8252945f53c3a2d211e303commit hash: 06a08e69f3acb846ad8252945f53c3a2d211e303commit hash: 06a08e69f3acb846ad8252945f53c3a2d211e303 files touched by this commit
Charlie Li (vishwin) search for other commits by this committer
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal

Any missed ports, feel free to bump.

Any ports that need setuptools at runtime can have the devel/py-setuptools
manually added back to RUN_DEPENDS, but understand that this practice
is deprecated; see CHANGES for details.
2.4.2
15 Nov 2024 09:20:25
commit hash: 212f90c9a36208a0aaddec41a526c62a23371e6fcommit hash: 212f90c9a36208a0aaddec41a526c62a23371e6fcommit hash: 212f90c9a36208a0aaddec41a526c62a23371e6fcommit hash: 212f90c9a36208a0aaddec41a526c62a23371e6f files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: update 2.1.0 → 2.4.2
2.1.0
13 Mar 2024 06:17:02
commit hash: e90eef0b5211fd844381d0414602cac84112f59bcommit hash: e90eef0b5211fd844381d0414602cac84112f59bcommit hash: e90eef0b5211fd844381d0414602cac84112f59bcommit hash: e90eef0b5211fd844381d0414602cac84112f59b files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: update 2.0.3 → 2.1.0

Reported by:	portscout
2.0.3
02 Aug 2023 01:38:52
commit hash: 43c9c433822e3afbd655c92113c5b622bf8c6a45commit hash: 43c9c433822e3afbd655c92113c5b622bf8c6a45commit hash: 43c9c433822e3afbd655c92113c5b622bf8c6a45commit hash: 43c9c433822e3afbd655c92113c5b622bf8c6a45 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: Update 1.8.1 → 2.0.3

Reported by:	portscout
1.8.1
11 Jan 2023 15:58:34
commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656 files touched by this commit
Dmitry Marakasov (amdmi3) search for other commits by this committer
*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
1.8.1
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
1.8.1
11 Aug 2022 20:04:34
commit hash: 7046b535da9a6fa764654b2121e02381811e8692commit hash: 7046b535da9a6fa764654b2121e02381811e8692commit hash: 7046b535da9a6fa764654b2121e02381811e8692commit hash: 7046b535da9a6fa764654b2121e02381811e8692 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: Update 1.8.0 -> 1.8.1

Reported by:	portscout
1.8.0
15 Jun 2022 20:56:03
commit hash: 19cdfb04af1e477b84138ad1c2058aeaa25a72cacommit hash: 19cdfb04af1e477b84138ad1c2058aeaa25a72cacommit hash: 19cdfb04af1e477b84138ad1c2058aeaa25a72cacommit hash: 19cdfb04af1e477b84138ad1c2058aeaa25a72ca files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-py3Dmol: New port: IPython interface for embedding 3Dmol.js views

Number of commits found: 10