notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)Want a good monitor light? See my photosAll times are UTC		 Ukraine
2024-11-06 Today brought in a new category: filesystems. Sadly, the website did not process it well. I am working on that. It may take a few days.
2024-11-07 Commit processing is halted. I have a fix for the new category. It is making its way through the system.
UPDATE: the backend is processing the original filesystems commit now. It should take about an hour.
UPDATE: as of 20:30 UTC, the filesystems commit has been processed. Commit processing is now up to date.
Port details
v_sim Visualization of atomic structures
3.8.0_11 science on this many watch lists=4 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.8.0_11Version of this port present on the latest quarterly branch.
Maintainer: thierry@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2005-12-10 21:46:15
Last Update: 2024-02-23 16:23:08
Commit Hash: 4cfee36
People watching this port, also watch:: mutt, poudriere, mined, kicad, vim
License: CeCILL
WWW:
https://gitlab.com/l_sim/v_sim
Description:
V_Sim visualizes atomic structures such as crystals, grain boundaries and so on (either in .d3 format as defined by F. Lançon, or in plain text format as described in the sample page). The rendering is done in pseudo-3D with colored sphere to represent the atoms. The user can interact through many functions to choose the view, the size of the atoms, their color, the background color, the type of fog... Much of it is detailled in the user guide. Moreover V_Sim allows to export the view as image in GIF, PS or more formats.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (160 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/v_sim-3.8.0_11/catalog.mk
  3. /usr/local/share/licenses/v_sim-3.8.0_11/LICENSE
  4. /usr/local/share/licenses/v_sim-3.8.0_11/CeCILL
  5. bin/v_sim
  6. lib/girepository-1.0/v_sim-3.8.typelib
  7. lib/libv_sim-3.a
  8. lib/libv_sim-3.la
  9. lib/libv_sim-3.so
  10. lib/libv_sim-3.so.8
  11. lib/libv_sim-3.so.8.0.0
  12. lib/python3.9/site-packages/gi/overrides/__pycache__/v_sim.cpython-39.opt-1.pyc
  13. lib/python3.9/site-packages/gi/overrides/__pycache__/v_sim.cpython-39.pyc
  14. lib/python3.9/site-packages/gi/overrides/v_sim.py
  15. lib/v_sim/plug-ins/libabinit.a
  16. lib/v_sim/plug-ins/libabinit.la
  17. lib/v_sim/plug-ins/libabinit.so
  18. lib/v_sim/plug-ins/libabinit.so.8
  19. lib/v_sim/plug-ins/libabinit.so.8.0.0
  20. lib/v_sim/plug-ins/libarchives.a
  21. lib/v_sim/plug-ins/libarchives.la
  22. lib/v_sim/plug-ins/libarchives.so
  23. lib/v_sim/plug-ins/libarchives.so.8
  24. lib/v_sim/plug-ins/libarchives.so.8.0.0
  25. lib/v_sim/plug-ins/libcube.a
  26. lib/v_sim/plug-ins/libcube.la
  27. lib/v_sim/plug-ins/libcube.so
  28. lib/v_sim/plug-ins/libcube.so.8
  29. lib/v_sim/plug-ins/libcube.so.8.0.0
  30. lib/v_sim/plug-ins/libetsf.a
  31. lib/v_sim/plug-ins/libetsf.la
  32. lib/v_sim/plug-ins/libetsf.so
  33. lib/v_sim/plug-ins/libetsf.so.8
  34. lib/v_sim/plug-ins/libetsf.so.8.0.0
  35. lib/v_sim/plug-ins/libobloader.a
  36. lib/v_sim/plug-ins/libobloader.la
  37. lib/v_sim/plug-ins/libobloader.so
  38. lib/v_sim/plug-ins/libobloader.so.8
  39. lib/v_sim/plug-ins/libobloader.so.8.0.0
  40. lib/v_sim/plug-ins/libplugmsym.a
  41. lib/v_sim/plug-ins/libplugmsym.la
  42. lib/v_sim/plug-ins/libplugmsym.so
  43. lib/v_sim/plug-ins/libplugmsym.so.8
  44. lib/v_sim/plug-ins/libplugmsym.so.8.0.0
  45. lib/v_sim/plug-ins/libpythongi.a
  46. lib/v_sim/plug-ins/libpythongi.la
  47. lib/v_sim/plug-ins/libpythongi.so
  48. lib/v_sim/plug-ins/libpythongi.so.8
  49. lib/v_sim/plug-ins/libpythongi.so.8.0.0
  50. lib/v_sim/plug-ins/libxsf.a
  51. lib/v_sim/plug-ins/libxsf.la
  52. lib/v_sim/plug-ins/libxsf.so
  53. lib/v_sim/plug-ins/libxsf.so.8
  54. lib/v_sim/plug-ins/libxsf.so.8.0.0
  55. share/doc/v_sim/ChangeLog.en
  56. share/doc/v_sim/ChangeLog.fr
  57. share/doc/v_sim/authors
  58. share/doc/v_sim/licence.en.txt
  59. share/doc/v_sim/licence.fr.txt
  60. share/doc/v_sim/pot2surf_help
  61. share/doc/v_sim/readme
  62. share/examples/v_sim/ab_silicon.in
  63. share/examples/v_sim/aluminium.d3
  64. share/examples/v_sim/cinchonidine.xsf.bz2
  65. share/examples/v_sim/cinchonidine.yaml
  66. share/examples/v_sim/cnt.Benzen_on_Ag111
  67. share/examples/v_sim/collisions.ascii
  68. share/examples/v_sim/coord_vib_g_co.xyz
  69. share/examples/v_sim/demo-browser.tar.gz
  70. share/examples/v_sim/demo.ascii
  71. share/examples/v_sim/demo.d3
  72. share/examples/v_sim/demo.xyz
  73. share/examples/v_sim/demo_spin.d3
  74. share/examples/v_sim/demo_spin.spin
  75. share/examples/v_sim/density-sih4.dat
  76. share/examples/v_sim/diff.ascii
  77. share/examples/v_sim/diff.dat
  78. share/examples/v_sim/h2o-dens.cube.bz2
  79. share/examples/v_sim/nq-netcdf.cdl
  80. share/examples/v_sim/nq-netcdf.nc
  81. share/examples/v_sim/planes.xml
  82. share/examples/v_sim/pygi_collisions.v_sim.py
  83. share/examples/v_sim/pygi_isolate.v_sim.py
  84. share/examples/v_sim/pygi_load.v_sim.py
  85. share/examples/v_sim/pygi_plot.v_sim.py
  86. share/examples/v_sim/pygi_rightMenu.v_sim.py
  87. share/examples/v_sim/pygi_rotate.v_sim.py
  88. share/examples/v_sim/si1002x1-o_DS1_DEN-etsf.nc
  89. share/examples/v_sim/silane.nc
  90. share/examples/v_sim/test_isosurfaces.ascii
  91. share/examples/v_sim/test_isosurfaces.surf
  92. share/examples/v_sim/values.xml
  93. share/gir-1.0/v_sim-3.8.gir
  94. share/icons/hicolor/16x16/apps/v_sim.png
  95. share/icons/hicolor/22x22/apps/v_sim.png
  96. share/icons/hicolor/24x24/apps/v_sim.png
  97. share/icons/hicolor/32x32/apps/v_sim.png
  98. share/icons/hicolor/48x48/apps/v_sim.png
  99. share/icons/hicolor/scalable/apps/v_sim.svg
  100. share/locale/fr/LC_MESSAGES/v_sim.mo
  101. share/man/man1/v_sim.1.gz
  102. share/pixmaps/v_sim.xpm
  103. share/v_sim/pixmaps/abinit.png
  104. share/v_sim/pixmaps/archives.png
  105. share/v_sim/pixmaps/axes-angles.png
  106. share/v_sim/pixmaps/axes-box.png
  107. share/v_sim/pixmaps/axes-button.png
  108. share/v_sim/pixmaps/axes-ortho.png
  109. share/v_sim/pixmaps/cube.png
  110. share/v_sim/pixmaps/icone-about.png
  111. share/v_sim/pixmaps/icone-dialog.png
  112. share/v_sim/pixmaps/icone-observe.png
  113. share/v_sim/pixmaps/icone-observe.xpm
  114. share/v_sim/pixmaps/liaison-bandeau.png
  115. share/v_sim/pixmaps/logo_grey.png
  116. share/v_sim/pixmaps/logo_petit.png
  117. share/v_sim/pixmaps/logo_rectangle.png
  118. share/v_sim/pixmaps/msym.png
  119. share/v_sim/pixmaps/nanoquanta.png
  120. share/v_sim/pixmaps/observe-bandeau.png
  121. share/v_sim/pixmaps/openbabel.png
  122. share/v_sim/pixmaps/pythongi.png
  123. share/v_sim/pixmaps/save-bandeau.png
  124. share/v_sim/pixmaps/stock-atomic.png
  125. share/v_sim/pixmaps/stock-axes_20.png
  126. share/v_sim/pixmaps/stock-browser_20.png
  127. share/v_sim/pixmaps/stock-data_20.png
  128. share/v_sim/pixmaps/stock-elements_20.png
  129. share/v_sim/pixmaps/stock-fog_20.png
  130. share/v_sim/pixmaps/stock-four-lights_20.png
  131. share/v_sim/pixmaps/stock-geometry_20.png
  132. share/v_sim/pixmaps/stock-go-and-back.png
  133. share/v_sim/pixmaps/stock-go-around.png
  134. share/v_sim/pixmaps/stock-go-once.png
  135. share/v_sim/pixmaps/stock-inter.png
  136. share/v_sim/pixmaps/stock-isosurfaces_20.png
  137. share/v_sim/pixmaps/stock-map_20.png
  138. share/v_sim/pixmaps/stock-masking.png
  139. share/v_sim/pixmaps/stock-menu-detach.png
  140. share/v_sim/pixmaps/stock-method_20.png
  141. share/v_sim/pixmaps/stock-one-light_20.png
  142. share/v_sim/pixmaps/stock-opengl_20.png
  143. share/v_sim/pixmaps/stock-phonons.png
  144. share/v_sim/pixmaps/stock-planes_20.png
  145. share/v_sim/pixmaps/stock-pythongi_20.png
  146. share/v_sim/pixmaps/stock-select-all_20.png
  147. share/v_sim/pixmaps/stock-spin.png
  148. share/v_sim/pixmaps/stock-union.png
  149. share/v_sim/pixmaps/stock-unselect-all_20.png
  150. share/v_sim/pixmaps/stock_effects-object-colorize_20.png
  151. share/v_sim/pixmaps/stock_media-play.png
  152. share/v_sim/pixmaps/stock_media-stop.png
  153. share/v_sim/pixmaps/stock_rotate_20.png
  154. share/v_sim/pixmaps/xsf.png
  155. share/v_sim/v_sim.par
  156. share/v_sim/v_sim.rc
  157. share/v_sim/v_sim.res
  158. @owner
  159. @group
  160. @mode
Collapse this list.
Dependency lines:
  • v_sim>0:science/v_sim
To install the port:
cd /usr/ports/science/v_sim/ && make install clean
To add the package, run one of these commands:
  • pkg install science/v_sim
  • pkg install v_sim
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: v_sim
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1665839345 SHA256 (l_sim-v_sim-9dc8e5a0b2f4e7237ac50a922b87d234ff56a6e5_GL0.tar.gz) = 8dcdfa0ff17e9ea41f56fb498c2efef20054086fddd427a552e48f17dcee4546 SIZE (l_sim-v_sim-9dc8e5a0b2f4e7237ac50a922b87d234ff56a6e5_GL0.tar.gz) = 6357693
Packages (timestamps in pop-ups are UTC):
v_sim
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest3.8.0_113.8.0_11--3.8.0_11---
FreeBSD:13:quarterly3.8.0_113.8.0_11--3.8.0_11---
FreeBSD:14:latest3.8.0_113.8.0_11--3.8.0_11---
FreeBSD:14:quarterly3.8.0_113.8.0_11--3.8.0_11---
FreeBSD:15:latest3.8.0_113.8.0_11n/a3.8.0_11n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. p5-XML-LibXML>0 : textproc/p5-XML-LibXML
  2. libarchive>0 : archivers/libarchive
  3. xcrysden : science/xcrysden
  4. bash : shells/bash
  5. abinit : science/abinit
  6. gfortran12 : lang/gcc12
  7. gmake>=4.3 : devel/gmake
  8. intltool-extract : textproc/intltool
  9. pkgconf>=1.3.0_1 : devel/pkgconf
  10. python3.9 : lang/python39
  11. gettext-runtime>=0.22_1 : devel/gettext-runtime
  12. msgfmt : devel/gettext-tools
  13. as : devel/binutils
  14. autoconf>=2.71 : devel/autoconf
  15. automake>=1.16.5 : devel/automake
  16. libtoolize : devel/libtool
  17. xorgproto>=0 : x11/xorgproto
  18. xorgproto>=0 : x11/xorgproto
  19. x11.pc : x11/libX11
Test dependencies:
  1. python3.9 : lang/python39
Runtime dependencies:
  1. py39-numpy>=1.16,1<1.26,1 : math/py-numpy@py39
  2. xcrysden : science/xcrysden
  3. libarchive>0 : archivers/libarchive
  4. py39-gobject3>0 : devel/py-gobject3@py39
  5. py39-matplotlib>0 : math/py-matplotlib@py39
  6. abinit : science/abinit
  7. gfortran12 : lang/gcc12
  8. python3.9 : lang/python39
  9. x11.pc : x11/libX11
Library dependencies:
  1. libfontconfig.so : x11-fonts/fontconfig
  2. libopenbabel.so : science/openbabel
  3. libfreetype.so : print/freetype2
  4. libharfbuzz.so : print/harfbuzz
  5. libyaml.so : textproc/libyaml
  6. libnetcdf.so : science/netcdf
  7. libmsym.so : science/libmsym
  8. libftgl.so : graphics/ftgl
  9. libxc.so : science/libxc
  10. libblas.so : math/blas
  11. liblapack.so : math/lapack
  12. libGL.so : graphics/libglvnd
  13. libGLU.so : graphics/libGLU
  14. libatk-1.0.so : accessibility/at-spi2-core
  15. libcairo.so : graphics/cairo
  16. libgdk_pixbuf-2.0.so : graphics/gdk-pixbuf2
  17. libglib-2.0.so : devel/glib20
  18. libintl.so : devel/gettext-runtime
  19. libgtk-3.so : x11-toolkits/gtk30
  20. libgirepository-1.0.so : devel/gobject-introspection
  21. libpango-1.0.so : x11-toolkits/pango
  22. libintl.so : devel/gettext-runtime
There are no ports dependent upon this port
Configuration Options:
===> The following configuration options are available for v_sim-3.8.0_11: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples NLS=on: Native Language Support ===> Use 'make config' to modify these settings
Options name:
science_v_sim
USES:
autoreconf blaslapack compiler:c11 fortran gl gmake gnome libtool:keepla localbase:ldflags pkgconfig python shebangfix tar:bzip2 xorg gettext
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://gitlab.com/l_sim/v_sim/-/archive/9dc8e5a0b2f4e7237ac50a922b87d234ff56a6e5.tar.gz?dummy=/
Collapse this list.

Number of commits found: 102 (showing only 2 on this page)

«  1 | 2 

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
3.1.2
22 Jan 2006 02:49:09
Original commit files touched by this commit		 edwin search for other commits by this committer 
Replace ugly "@unexec rmdir %D... 2>/dev/null || true" with @dirrmtry

Approved by:    krion@
PR:             ports/88711 (related)
3.1.2
10 Dec 2005 21:45:28
Original commit files touched by this commit		 thierry search for other commits by this committer 
Add V_Sim, a program to visualize atomic structures such as crystals, grain
boundaries and so on.

Number of commits found: 102 (showing only 2 on this page)

«  1 | 2 
Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
Security Policy
Privacy
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
electron31Nov 15
electron31Nov 14
gitlabNov 14
postgresql12-clientNov 14
postgresql12-plperlNov 14
postgresql12-serverNov 14
postgresql12-serverNov 14
postgresql13-clientNov 14
postgresql13-plperlNov 14
postgresql13-serverNov 14
postgresql13-serverNov 14
postgresql14-clientNov 14
postgresql14-plperlNov 14
postgresql14-serverNov 14
postgresql14-serverNov 14

18 vulnerabilities affecting 148 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last processed:
2024-11-15 17:30:48 UTC


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)

Calculated hourly:
Port count 32997
Broken 104
Deprecated 174
Ignore 233
Forbidden 1
Restricted 2
No CDROM 1
Vulnerable 46
Expired 12
Set to expire 136
Interactive 0
new 24 hours 3
new 48 hours17
new 7 days31
new fortnight222
new month289
Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD 		Valid HTML, CSS, and RSS. Copyright © 2000-2024 Dan Langille. All rights reserved.