- Fix compiler now that -Wl,B has been added to fortran link args

Submitted by:	me

Replace TABs with spaces, otherwise it breaks with python-3.

Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)

Fix path.

Respect FFLAGS.

Submitted by:	wg
Tested by:	gerald

- this change sneaked in by accident. Reverting that.

- clean-up WITH_FIXED_FENV conditional, because it is only used for
  versions of FreeBSD, we not support anymore.
- remove LATEST_LINK. There is PYTHON_PKGNAMEPREFIX set and in future
  we may have this package built against different python versions.

Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes".  In most cases
USE_GCC=yes has been omitted though.

Remove USE_FORTRAN handling from bsd.port.mk and bsd.gcc.mk.

Minor cleanups in some ports like USE_GMAKE, NOPORTDOCS,...

Exp-run:	bdrewery
Approved by:	portmgr (bdrewery)

- update to 1.8.0
- clarify LICENSE (BSD3C)
- suppor staging

while here:
- utilize PYTHON_PY3K_PLIST_HACK
- install docs uncoditionally into stage area
- convert LIB_DEPENDS to the new notation
- sort packing list

PR:		186677
Submitted by:	Johannes Jost Meixner <xmj@chaot.net>

Reset maintainer for llwang@infor.org

Reset maintainership for llwang@infor.org due to multiple timeouts and email
address permanent failure. Return all ports to the free pool except
py-numpy, which is taken under the wing of the python@ team.

We thank you for your contribution to the FreeBSD project

Approved by:	portmgr

math/py-numpy: Remove Atlas WITH_STATIC notification using ECHO_MSG

Shell commands can't be used in a Makefile without a target. Remove the atlas
WITH_STATIC messaging until a more suitable mechanism can be found.

PR:		ports/184775
Reported by:	Roland Smith <rsmith@xs4all.nl>

math/py-numpy: Add missing ending quotation to ECHO_MSG

Add a missing ending quotation from the last ECHO_MSG command added in r336423.

PR:		ports/184775
Reported by:	Roland Smith <rsmith@xs4all.nl>

math/py-numpy: Fix static library check that assumes atlas is installed

- Use BUILD_DEPENDS to check for the atlas static library at pre-build
  time instead of checking if the file exists (False if atlas is not
  installed)

- Replace IGNORE with a message to the user notifying them that
  an atlas install WITH_STATIC is needed, and provide clues as possible
  actions without being too prescriptive.

As discussed with eadler@, a correct resolution to "ports depending on other
ports with specific OPTIONS" is either an atlas slave port
(ie: atlas-static), or to modify atlas to install both shared and static
libraries.

This change is a net gain on the existing broken behaviour, by fixing
the check, while retaining the user notification.

PR:		ports/178094
Reviewed by:	jhibbits, eadler
Approved by:	maintainer timeout (7+ months)

Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui

Add NO_STAGE all over the place in preparation for the staging support (cat:
math)

Add missing files to plist;
Fix plist (hopefully) so it fits both python33 and python2.

Fix DISTFILES for docs.

Noted by:	Rainer Hurling <rhurlin@gwdg.de>

Update to version 1.7.0 (and unbreak with python-3.3).

PR:		178256
Submitted by:	Roland Smith <rsmith@xs4all.nl>
Approved by:	maintainer

- Fix all cases of 'No newline at end of file' in ports tree

Approved by: portmgr (bapt)

- Remove automatic dependency to SuiteSparse; use OPTIONS instead
- Change to new OPTIONS style

PR:		ports/171349
Submitted by:	Li-Lun Wang <llwang@infor.org> (maintainer)
Reported by:	A.J. Kehoe IV (Nanoman)

- Restore distinfo of fenv.c/fenv.h for older FreeBSD which were removed in the
commit of 1.6.2 update

PR:		ports/170224
Submitted by:	Li-Lun Wang <llwang@infor.org>

- Update to 1.6.2
- Add LICENSE

PR:             169162
Submitted by:   koobs <koobs.freebsd@gmail.com>
Approved by:    maintainer

- Support for -Wl,rpath= in f2py, now passed by bsd.gcc.mk
- Fix build for comms/wsjt

PR:             ports/164479
Submitted by:   maintainer
Approved by:    gabor (mentor)

- Update to 1.6.1

PR:             162894
Submitted by:   Gereon Kaiping <kta1c10!gereon@linta.de>
Approved by:    "Li-Lun Leland Wang" <llwang@infor.org> (maintainer)
Feature safe:   yes

adjust linking and comments in dependent ports after the math/atlas update;
math/atlas-devel will be updated to use the same constructs at a later date

PR:             162706
Approved by:    miwi (portmgr)
Feature safe:   yes

- Update math/py-numpy to reflect changes in math/atlas
- Bump PORTREVISION
- Fix build for science/py-scipy

PR:             ports/161400
Submitted by:   Li-Lun Wang <llwang at infor.org> (maintainer)

- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
- Fix all ports that add {CPP,LD}FLAGS to *_ENV to modify flags instead

PR:             157936
Submitted by:   myself
Exp-runs by:    pav
Approved by:    pav

- Slightly simplify the fenv fix, and note that FreeBSD
7.3 and 7.4 no longer need the fix after the MFC of r203441 on
17 February 2010

- While here, remove MD5 checksums in distinfo

PR:             154742
Approved by:    makc, miwi (mentors, implicit)
                Li-Lun Wang (maintainer)

Update to 1.5.1
Fix doc checksum mismatch

PR:             ports/152715
Submitted by:   Li-Lun Wang (llwang@infor.org) (maintainer)
Approved by:    itetcu (mentor) (implicit)

- Update to 1.5.0

PR:             ports/151234
Submitted by:   Li-Lun Wang (Leland Wang) <llwang@infor.org> (maintainer)

- Update to 1.4.1

PR:             ports/146007
Submitted by:   Wen Heping (myself)
Approved by:    maintainer

Unbreak.

PR:             143529
Patch from:     MAINTAINER ("Li-Lun Wang (Leland Wang)" <llwang@infor.org>)

- Mark BROKEN: does not build

Reported by:    pointyhat
Feature safe:   yes

- Update to 1.4.0

PR:             ports/142116
Submitted by:   wen
Approved by:    "Li-Lun Wang (Leland Wang)" <llwang AT infor.org> (maintainer)

Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
implies lang/gcc44 up from lang/gcc43.

Approved by:    portmgr

- Switch SourceForge ports to the new File Release System: categories starting
with M

* Fix build of science/py-scipy when math/suitesparse is installed, by
  correctly detect and depend on it in math/py-numpy
* Replace the old numpy documentation with the new numpy book
* Explicitly tell the distutil to use gnu95 fortran compiler
* Use ${PYTHONPREFIX_SITELIBDIR} rather than ${PYTHON_SITELIBDIR} when
  generating the packing list for science/py-scipy
* Bump PORTREVISIONs, for packing lists are changed

PR:             ports/136058
Submitted by:   Li-Lun Wang (Leland Wang) <llwang AT infor.org> (maintainer)

- Update to  1.3.0

PR:             134221
Submitted by:   Wen Heping <wenheping@gmail.com>
Approved by:    maintainer timeout

- Update to 1.2.1

PR:             ports/129581
Submitted by:   Wen Heping <wenheping@gmail.com>
Approved by:    Li-Lun "Leland" Wang" <llwang@infor.org> (maintainer)

Remove run-time dependency on lang/gcc42 which is now transparently
handled by USE_FORTRAN.  Tweak various aspects of configuration.

Submitted by:   Li-Lun "Leland" Wang <llwang@infor.org> (maintainer)

Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.

- Update to 1.2.0

PR:             127865
Submitted by:   Wen heping <wenheping@gmail.com>
Approved by:    maintainer

- Fix installation while WITH_ATLAS is specified [1]
- Fix plist

PR:             ports/126960 [1]
Submitted by:   Arjan Gijsberts <arjan AT liralab.it>
Approved by:    maintainer
Approved by:    portmgr (erwin)

Restore PORTEPOCH that got lost in the previous revision.

Update to 1.1.1

- Add lang/gcc42 into RUN_DEPENDS
- Remove ${PYTHON_REL} < 200 old stuff
- Remove definitions that already include in bsd.gcc.mk

Approved by:    maintainer via IRC

- Update to 1.0.4

PR:             ports/122492
Submitted by:   dikshie <dikshie at lapi.itb.ac.id>
Approved by:    Li-Lun "Leland" Wang <llwang at infor.org> (maintainer)

- Remove CONFLICT, lang/f2py removed

Approved by:    miwi (co-mentor)

- I added -fPIC to compile_switch to work around build of fftpack in scipy
  on amd64.
  A better fix would be to set pic_flags instead, and have scipy build a
  shared object for dfftpack instead a static archive, but I didn't figure
  out how. [1]
- Pass maintainership to llwang@infor.org

PR:             ports/112429 [1]
Submitted by:   Li-Lun "Leland" Wang <llwang@infor.org> (new maintainer)

- USE_FORTRAN=yes to use FORTRAN compiler.

Notified by:    maho
Approved by:    ehaupt (mentor)

- Forgotten files for 1.0.2 commit

Approved by:    ehaupt (mentor)

Update distinfo, was forgotten by the last commit.

Notified by:    bf <bf2006a@yahoo.com>

- Remove support for 4.x
- Fix glitch with gfortran attempting to use libg2c instead of libgfortran [1]
- math/py-numpy incorrect post-patch for site-cfg [2]
- Update version to 1.0.2

Notified by:    kris (via pointyhat) [1]
PR:             ports/112429 [2]
Approved by:    ehaupt (mentor)

- maho wants WANT_FORTRAN knob in gfortran ports

Submitted by:   maho
Approved by:    ehaupt (mentor)

- finish g77 to gfortran conversion
- change maintainer address to FreeBSD.org one
- fold in changes suggested by [1]

PR:             107022, 108807 (based on) [1]
Submitted by:   thinker@heaven.branda.to [1]
Approved by: ehaupt (mentor)

(Forgot to commit)
* Migrate to gfortran.
* Bump port revision.

* Migrate to gfortran.
* Bump port revision.

Approved by:  portmgr(kris)

- Update to 1.0.1

PR:             ports/107729
Submitted by:   clsung
Approved by:    maintainer (Diane Bruce)

Fix a run time error, don't append python version to the name of the
executable.

Submitted by:   Diane Bruce (maintainer)
Approved by:    tmclaught (implicit)

Update to version 1.0
Change maintainer

PR:             106551
Submitted by:   Diane Bruce <db@db.net>
Approved by:    tmclaugh (implicit)

Reassign maintainership to db@db.net who has been been awaiting maintainer-
timeouts with the PRs she has submitted.

Hat:            portmgr

- Update to 1.0rc1
- Add options for ATLAS
- Fix ATLAS detection
- Use feclearexcept(3) rather than fpsetsticky(3) on 5.3+
- Add CONFLICTS for f2py. Both ports install bin/f2py

PR:             ports/103827
Submitted by:   Li-Lun Wang
Approved by:    maintainer timeout (6 weeks)

- Mark BROKEN on FreeBSD 4.X: does not compile

Reported by:    krismail

The fundamental package needed for scientific computing with Python is
called NumPy.  This package contains:

    * a powerful N-dimensional array object
    * sophisticated (broadcasting) functions
    * basic linear algebra functions
    * basic Fourier transforms
    * sophisticated random number capabilities
    * tools for integrating Fortran code.

NumPy derives from the old Numeric code base and can be used as a
replacement for Numeric.   It also adds the features introduced by numarray
and can also be used to replace numarray.

Note:   Development for Numeric has ceased, and users should transisition to
        NumPy as quickly as possible.

WWW: http://numpy.scipy.org/

PR:             ports/102458
Submitted by:   Tony Maher <anthony.maher@uts.edu.au>